Gene Pden_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1852 
Symbol 
ID4581036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1851392 
End bp1852327 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID639769172 
Productcation diffusion facilitator family transporter 
Protein accessionYP_915645 
Protein GI119384589 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.63223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.610835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATT CGCATGCGCA TGAGGGCGAG CACGGTCATT CGCATCTGCC GGGCGGGGTG 
GGCGACGGCA CCATCCTGAT CGCGGTGGTG GTCAACCTGG CGCTGACCGG GGCGCAGATC
CTGGGCGGCT ATGTCGCCGA TTCCACGGCG CTGATCGCGG ATGGGGTGCA TAATCTTTCG
GATGCGCTGG CGCTGGTGCT GGCCTTTGGC GCCCGGCGCC TGGCCCGGCG TCCCGCCAGC
CCCGGGATGA GCTATGGCTG GGGACGGGCC GAGGTCGTCG CGGCCTTCGT CAACTATATC
GCGCTGATCG CGATTTCGGT CTGGCTGGGG ATCGAGGCGC TGGGGCGCAT GGTCGAGCCG
CCGCAGGTCG CGGGTGGGCT GGTGATGGCC TTGGCGGGTT TTGCGCTGCT CGTGGACATG
GCTACGGCGG CGCTGGTCTG GCGCGCCGCG AAGGAGAGCG TGAACATCCG CGCCGCCTTC
CTGCACAACC TGGCCGATGC GGCGGTCTCG GTTGCGGTGA TCCTGGGCGG GGCGCTGATC
TGGGCCTTTG GCTGGCATCT CGCCGATCCG GTGCTGACGC TGCTGATCTC GGGGGTGATC
CTGTGGCATG TCGGGCAGGA GATCGGGCCG GTGATGCGCA TGCTGATGCT GGCCGCACCC
GCCGGCGTGG ATCACGCGGC GCTGATCGGC GCCATGGCCG GGGTCGAGGG CGTCGCCGGC
GCGCATCACC TGCATCTGTG GCAGATCGAC GAGCGCCGCA CGGCGCTGTC GGTGCATCTG
GTCATGCGCG ACGGGGCCGA TGCGGTGATG GCGGTGCGCC AGGCCAAGGC AATGTTGCGG
CGCGATTTCG GCATCGACCA TGCCACGATC GAGGCCGAGC GCGAAGGCGA TGCCTGCAGC
GATGCCGGCG ACGGCCATGA CGGCCATCGC CATTAG
 
Protein sequence
MGHSHAHEGE HGHSHLPGGV GDGTILIAVV VNLALTGAQI LGGYVADSTA LIADGVHNLS 
DALALVLAFG ARRLARRPAS PGMSYGWGRA EVVAAFVNYI ALIAISVWLG IEALGRMVEP
PQVAGGLVMA LAGFALLVDM ATAALVWRAA KESVNIRAAF LHNLADAAVS VAVILGGALI
WAFGWHLADP VLTLLISGVI LWHVGQEIGP VMRMLMLAAP AGVDHAALIG AMAGVEGVAG
AHHLHLWQID ERRTALSVHL VMRDGADAVM AVRQAKAMLR RDFGIDHATI EAEREGDACS
DAGDGHDGHR H