| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1836 |
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| Symbol | |
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| ID | 4581020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1834978 |
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| End bp | 1836948 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639769156 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_915629 |
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| Protein GI | 119384573 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.456883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG ATCTCTTCCC CGCCGCGGAT AAGGCTTCCG AAAGCTATTC GGCCTCCTCG
ATCGAGGTGC TCGAAGGGCT GGAGCCGGTG CGCAAGCGAC CCGGCATGTA TATCGGCGGC
ACCGACGAAC GCGCGCTGCA TCACCTGGTA GCCGAGATCC TCGACAACTC GATGGACGAA
GCTGTGGCCG GCCATGCCAG CCGCATCGAG GTCGAACTGC TGGCCGATTT CAGCGTGGTG
ATCCGCGACA ACGGCCGCGG CATCCCCATC GACCCGCACC CCAAGTTCCC CGGCAAGTCG
GCGCTGGAGG TGATCCTGTG CACGCTGCAT GCCGGCGGCA AGTTCTCGGG CGATGTCTAC
CAGACCTCGG GCGGGTTGCA CGGCGTCGGC GCCTCGGTCG TGAACGCGCT TTCCGACAGC
ATGGTGGTGC AGGTCGCCCG CAACCGCGAA CTTTACGAGC AGTGCTTCTC GCGCGGCCTG
CCCCTTGGCC CGGTCGAGAA AGTCGGCGCC GCCCCGAACC GGCGCGGCAC CACCGTCACC
TTCCATGCCG ACGAGCAGAT CTTCGGCCAT CACCGCTTCA AGCCGGCGCG GCTGCTGCGC
ATGGTCAAGT CCAAGGCCTA TCTGTTCTCG GGCGTCGAGA TCCGCTGGAA ATCCGAGATC
GACGACGGCG AGACGCCGCT GGAGGCCACG TTCCACTTCC CCGGCGGGCT TGCCGACTAT
CTGGGCGAGG TGCTGGGCAA TGCCTCGACC TATGCCGACC GTCCCTTTGC CGGCAGCGTC
GACTTCAAGG AAAAGTTCAA CACGCCCGGC AAGGTGGATT GGGCAATCAA CTGGACACCG
TCGCGCGACG GCTTCATCCA GTCCTATTGC AACACCGTGC CCACGCCCGA GGGCGGCACG
CACGAGGCCG GCTTCTGGTC CGCCATCCTG CGCGGCATCC GCGCCTATGG CGAGCGGGTC
AGCAACAAGA AGGCGGCGCA GATCACCCGC GACGACCTGC TGGCCGGCGG CTGCGCGCTG
GTCTCCTGCT TCATCCGCGA GCCGGAATTC GTCGGCCAGA CCAAGGACCG CCTGGCCACC
ACCGAGGCGC AGCGGCTGGT CGAGGGCGCG GTGCGCGACC ATTTCGACAA CTGGCTGGCG
GCGGATACGA AATCGGCGGG CGCCATCTTG GATTTCCTGG TGCTGCGGGC CGAGGAACGG
CTGCGCCGCC GACAGGAAAA GGAAACCGCC CGGAAATCGG CGACGAAAAA GCTGCGCCTG
CCGGGCAAGC TGGTCGATTG CTCGGCCACC AATCGCGAAG GCACCGAGCT TTTTATCGTC
GAGGGCGATT CGGCGGGCGG CAGTGCCAAG ATGGCACGCG AGCGCACCAC CCAGGCGCTC
TTGCCCCTGC GCGGCAAGAT CCTGAACGTG CTGGGCGCGG CCTCTTCCAA GCTCGGCTCG
AACCAGGAGA TCGCCGATCT CTGCCAGGCG CTTGGCGTCG GCATGGGCTC GCGCTTCAAC
GTCGACGACC TGCGCTATGA CAAGATCATC ATCATGACCG ATGCCGATGT GGACGGTGCC
CATATCGCCT CGCTGCTGAT GACCTTTTTC TTCACCCAGA TGCGGCCGCT GATCGACAAG
GGGCATCTCT ACCTCGCCTG CCCGCCGCTT TACCGGCTGA CGCAGGGGCC ACATCGCATC
TATGTCGCCG ACGATGCCGA AAAGGAATCG TGGCTGGCCA AGGGGCTGGG CGGCAAGGGC
AAGATCGACG TGCAGCGCTT CAAGGGGCTG GGCGAGATGG ACGCCAAGGA TCTGAAGGAC
ACCACGATGA ACCCCCGGAC GCGCAAGCTG ATCCGCGTCT CGATCGACGA GGAAGAGGGC
GGCGAGACCG GCGATCTGGT CGAGCGGCTG ATGGGCAAGA AGCCCGAACT GCGCTTCCAG
TTCATCCAGG AGAACGCCCA GTTCGCCGAT GCCGAGGAAC TGGACGTGTG A
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| Protein sequence | MADDLFPAAD KASESYSASS IEVLEGLEPV RKRPGMYIGG TDERALHHLV AEILDNSMDE
AVAGHASRIE VELLADFSVV IRDNGRGIPI DPHPKFPGKS ALEVILCTLH AGGKFSGDVY
QTSGGLHGVG ASVVNALSDS MVVQVARNRE LYEQCFSRGL PLGPVEKVGA APNRRGTTVT
FHADEQIFGH HRFKPARLLR MVKSKAYLFS GVEIRWKSEI DDGETPLEAT FHFPGGLADY
LGEVLGNAST YADRPFAGSV DFKEKFNTPG KVDWAINWTP SRDGFIQSYC NTVPTPEGGT
HEAGFWSAIL RGIRAYGERV SNKKAAQITR DDLLAGGCAL VSCFIREPEF VGQTKDRLAT
TEAQRLVEGA VRDHFDNWLA ADTKSAGAIL DFLVLRAEER LRRRQEKETA RKSATKKLRL
PGKLVDCSAT NREGTELFIV EGDSAGGSAK MARERTTQAL LPLRGKILNV LGAASSKLGS
NQEIADLCQA LGVGMGSRFN VDDLRYDKII IMTDADVDGA HIASLLMTFF FTQMRPLIDK
GHLYLACPPL YRLTQGPHRI YVADDAEKES WLAKGLGGKG KIDVQRFKGL GEMDAKDLKD
TTMNPRTRKL IRVSIDEEEG GETGDLVERL MGKKPELRFQ FIQENAQFAD AEELDV
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