Gene Pden_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1821 
Symbol 
ID4578533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1817894 
End bp1819114 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID639769141 
Producthypothetical protein 
Protein accessionYP_915614 
Protein GI119384558 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0124025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.382014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGC TAAGGGGGAA TCCCCCGTCC AATGGCCATG AGGAGCCGGC GGCATTGCCG 
CCCGGTTTCG ACGATCCTGA TATTCGTCTT GGCGACCTGA TGCGGGGCGA ACGGGCCACG
TTGGGCAAGT CGCTGCTGGA TGTCCAGCGC GAATTGCGCA TTCGTGCCTC CTATGTCGCT
GCCATCGAGA ATTGCGACAT CTCCGCCTTC GACACGCCCA GCTTCATCGC GGGCTATGTC
CGCTCCTATG CGCGCTATCT GGGCATGGAT GCCGACTGGA CCTTCCGTCG TTTCTGCCAG
GAATCGGGCT TCCAGCCGAC GCATGGCATG GCGCCTTCCG CCGCGGGGCC GAAGCCGCAG
CGCCGGCCCT CGGACCCGGC CGAGGCGCTG GCCAATCCGC ATCCGATCTT CCTGCCCCGG
CAGGAAAGCG TCTGGAACTC GATCGAGCCG CGGGCCATCG GCTCGCTGCT GGTCATGGTC
GTGCTGGCCT GCGGGCTGGG TTATGGCGGC TGGACCGTTC TGCAAGAGGT GCAGAAGGTC
AACCTGACCC CCGGCGACCA GGCGCCCGGC GTGATCGCCG CGCTCGATCC GGTGCAGGAG
GCCGCCGAGC CCGAAACCGT GGAATCGGCC CAGGTCAACC TGCCGCGCCC CGAGGGGCTG
GACCGCACCT ATCGCCCGCA GGCGCTGGAG GTGCCGGTGC TGATGGCCCG CGACGGACCC
ATCGCCGCCA TCGACCCGGG TCTGAATGCG CCGGCCATGC AACCCGAAGG CGCCGAACCG
GTGGCCCGCA TCGCCGCAGT CCAGGACCGG GTCCATGGCC CGCAAATGCC GGCCGAGCAG
GCCGCCGTAC GCACCGTGGC CCCCGATGCG CCCGAGGTCG AGATCCTGGC CGCCCGCCCG
GCCTGGGTGC GCGTCACCTC GGCCGATGGC ACGGTGCTGT TGGAAAAGAC CATGGACGCC
GGCGAGCGTT TCGCCCTGCC CAAGCTTGAA GCGCCGCCGG TGCTGCGTGC GGGCAATTCG
GGCGCGATCT ATTTCGCGGT GAACGGCCGC ACCTACGGTC CGGCCGCGCC CGGTGCCAAG
GTGGTCAAGA ATGTCGAGCT TTCGCCCAAT GCGCTGACCG CGAAATTCGC CTTTGCCGAC
CTGGCCAAGG ACCCGCAACT GGCCGAGATG GTGTCCTTCG CGTCGGCAGG CCAGGCGGAA
CAGGTGCCCG TGCAGGATTG A
 
Protein sequence
MIGLRGNPPS NGHEEPAALP PGFDDPDIRL GDLMRGERAT LGKSLLDVQR ELRIRASYVA 
AIENCDISAF DTPSFIAGYV RSYARYLGMD ADWTFRRFCQ ESGFQPTHGM APSAAGPKPQ
RRPSDPAEAL ANPHPIFLPR QESVWNSIEP RAIGSLLVMV VLACGLGYGG WTVLQEVQKV
NLTPGDQAPG VIAALDPVQE AAEPETVESA QVNLPRPEGL DRTYRPQALE VPVLMARDGP
IAAIDPGLNA PAMQPEGAEP VARIAAVQDR VHGPQMPAEQ AAVRTVAPDA PEVEILAARP
AWVRVTSADG TVLLEKTMDA GERFALPKLE APPVLRAGNS GAIYFAVNGR TYGPAAPGAK
VVKNVELSPN ALTAKFAFAD LAKDPQLAEM VSFASAGQAE QVPVQD