| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1807 |
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| Symbol | |
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| ID | 4580507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1800075 |
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| End bp | 1802072 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639769127 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_915600 |
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| Protein GI | 119384544 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.625712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.143321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCGGC CGTGCCGGGC GCGGCGGATC ACGCAATTGC ATGTTGAACC GGGGCCGAGG
GCTGCTAGCT TTGGCGCCCG AGGCAGGCTG CTGCCCGAGC AAGACCCAAA CAAGGATCGA
CAAGACCCGA TGACGATGCG TTTCCTGCGA CATGCCCCGA TGGTTGCCCT TGTGGCGTTG
CTGCCCGGCT GGACCCTGGC GCAGGAGCAG CAGAAGCAGG AGCCCAAGAC CATCGTGTCG
CACGGCATCT CGGTCTTCGG CGAGCCCGAA CTGCCCGCCG ATTTCCCGCA TCTGCGCTAT
GTGAACCCGG AGGCGCCCAA GGGCGGCGAG ATTTCGGAAA GCTGGCTGGG CGGTTTCGAC
AGCTACAATC CCTTTACCCA TCGCGGCCGC GCCGGCCGGC TTTCGGTCAT CATGCTCGAA
CGGCTGATGG AGGATCCGGC GGATGAGCGT GGTTCGTCCT ATTGCCTGCT TTGCGAGACC
ATCGAATATC CCGAAAGCCG CGACTGGGTG ATCTTCCACC TGCGGCCCGA GGCGAAGTTC
TCGGACGGAT CGCCGCTGAC CGCGCATGAC GTGCTGTTTT CCTTCGAGCT CTTGCGCGAC
AGGGGGCTGT CTTCCTATCG CACCGGCATC GCCAAGATGG TCGCCAAGGC CGAGGTGATC
GACGATCACA CCATCAAGTT CATATTCCAG CCGGATTATC CGCGCCGCGA CGTGATCCAG
CAGGCCGGTA GCCAGATCGT CTTCTCGCGC GAGGATTTCC GCAAGAACGA CCGCGACATC
GAGCGGTCGA GCAATATCCC CTTCCTCGGC TCGGGGCCCT ATGTCTTCGA TGCGGCCGAG
ATGGGCCGCT CGATGACGGT GCGCCGCAAC CCGGACTACT GGGGCAAGGA CTTGCCGATC
AACGTCGGGC GCCACAATTT CGACAAGATC CGCTTCGAGT ATTTCACCGA TTACGACGCC
GCTTTCGAGG CCTTCAAGGC CGGGGTCTAT ACCTTCCGCA ACGAGGTTTC CTCGATCCAC
TGGGCGACGC GCTACGATTT CCCGGCTCTG AGATCCGGTG CGGTCAAGCG GGAAATGCTG
CCCAACGGCG ATCTCGCGAC CGGCCAGTCC TGGATCTTCA ACCTGCGGCG CGAGAAATGG
CAGGACATCC GCGTCCGCGA GGCGATCGGG CTGGTGTTCA ACTTCGAATG GTCGAACGAG
ACGCTGTTCT ACGGGCTCAA CACCCGGGTC AACTCCTTCT GGGACAACAG CGATCTGGCC
GCCACGGGCA AGCCGTCCGG GGCCGAGCTG GAACTGCTGA AGCCGCTGGC CAAGGATCTG
CCCGAGGGCG TCCTGACCGA GGATGCCGTG GTCCAGCCCG TTTCGGGCAA GTCGCAGCTC
GACCGCAGGA ACCTGCGCAA GGCCTCGGCG CTTCTGGACG AGGCGGGCTG GAAGGCCGGT
TCCGACGGGA TGCGCGTGAA TGCGAAGGGC GAGCGGCTGA AGCTGGAAAT CCTGAACGAC
AACCAGAGCT TCGACCGCAT CATCAACCCC TTCGTGCAGA ACCTGCGCGC GCTTGGCATC
GATGCGGTGA ACGCGCGGGT GGACGACGCC CAGATGACTG CCCGCACCCG CAGCCACGAT
TTCGACATGA TCACCGACAA TTTCCTGCTG GGATTCTATG TCGGCGGCGG GACCGAGCAG
GTCTTCGGCT CCGAGAACGT GGGCGACGTC TTCAACCCGG CCGGCCTGGC CAATCCCGCC
ATCGACGCGC TGATCGAAAA GGGCATCCAG GCAACCACGC AGGAAGAGAT GGACACCATC
ATCCATGCGC TGGACCGCAG CCTGCGCGCG CTGCGCTTCT GGGTGCCGCA ATGGTACAAG
GCCGAGCATA CCGTCGCATA TTACGACATT TTCGCCCATC CCGAGACCTT GCCGCCCTAT
GCGCTGGGTG AGCTTGATTT CTGGTGGTAT GACGCGGATA AGGCGGAAAA GCTGAAACAA
TCCGGCGCGC TGCGCTAG
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| Protein sequence | MPRPCRARRI TQLHVEPGPR AASFGARGRL LPEQDPNKDR QDPMTMRFLR HAPMVALVAL
LPGWTLAQEQ QKQEPKTIVS HGISVFGEPE LPADFPHLRY VNPEAPKGGE ISESWLGGFD
SYNPFTHRGR AGRLSVIMLE RLMEDPADER GSSYCLLCET IEYPESRDWV IFHLRPEAKF
SDGSPLTAHD VLFSFELLRD RGLSSYRTGI AKMVAKAEVI DDHTIKFIFQ PDYPRRDVIQ
QAGSQIVFSR EDFRKNDRDI ERSSNIPFLG SGPYVFDAAE MGRSMTVRRN PDYWGKDLPI
NVGRHNFDKI RFEYFTDYDA AFEAFKAGVY TFRNEVSSIH WATRYDFPAL RSGAVKREML
PNGDLATGQS WIFNLRREKW QDIRVREAIG LVFNFEWSNE TLFYGLNTRV NSFWDNSDLA
ATGKPSGAEL ELLKPLAKDL PEGVLTEDAV VQPVSGKSQL DRRNLRKASA LLDEAGWKAG
SDGMRVNAKG ERLKLEILND NQSFDRIINP FVQNLRALGI DAVNARVDDA QMTARTRSHD
FDMITDNFLL GFYVGGGTEQ VFGSENVGDV FNPAGLANPA IDALIEKGIQ ATTQEEMDTI
IHALDRSLRA LRFWVPQWYK AEHTVAYYDI FAHPETLPPY ALGELDFWWY DADKAEKLKQ
SGALR
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