| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1785 |
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| Symbol | |
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| ID | 4580969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1778762 |
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| End bp | 1780048 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639769103 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_915578 |
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| Protein GI | 119384522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00231258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGTT CCTTGCCCCG CCATCCCGTC GCACGCCCCC TGATCGGCAC CCGCATCCGC
GAGCGCCGCC TGTCGCTCGG CCGGCGCCAG ACCGAGGTGG CGCGCCGGGC CGAGATCTCG
GCCGCCTATC TCAACCTCAT CGAGCACAAC CGCCGCCCGG TCGGCGAGGA ACTGCTGTCG
CGGCTGGCCG ATGCACTGGA GATCGACGCG ACCGAGCTGG CCTCGGACCG CGAGGAGGCG
CTGATCGGCG CGCTGCGCGA GGCGGCGGCG CGCGCCGCCG ACCAGCCCGG CGCCACGGTC
GAGCTGGACC AGATCGCCGA ATTCGCCGCC CGGTTTCCCG GCTGGGCCTC GGCATTGGCC
GGGGTCACGC GCCGCGCCGA TGCGCTGGAG CGGCGGCTGA TCGCGCTGTC GGACCGCATG
ACCCGCGACC CCTATCTGCT GGCGACGCTG CACGAGGTGC AATCGGCGGT CACGGCGCTG
CGCTCGACCG CCTCGATCCT GGCCGAGACG CCCGAGATCG AGCCGGAATG GCGCGACCGA
TTCCATGCCA ACCTGGACAG CGACAGCCAG CGGCTGTCCC GCACCGCGCA ATCGCTCGTC
GCCTATCTGG ACAGCTTCGA GGACGAGGCG GTGCCGATGT CTCCGCGGGA GGAGGTCGAG
GCCTGGATCG CCGCCGGCCA ACCCGAGCCC GCCGAGGCGA CGGAGCTTGC CTCGGATGCG
GCGCGGGTCT TGGCGCAGGA TCTGCTGGCG GCACAGGCGC GCGACCGCGC CGCGCTGCCC
GATGCGGCGC TGGCGGCGGC GGTGGACGAG GCCGGCGAGG CCGCCGACGA CCCGGCGGTG
ATCGCAGCGA TTCTGGGGCA GCCGCTGGAC CTGGTGCTGC GCCGGCTGGG CATGCTGCGT
CCGGGCGCCT GGGCGCAGGC CGGGCTGGTG GTCTGCGACG GCTCGGGCGC CACGCTGTTT
CGCCACGCCG CGCCGGGTTT CGAGCTGCCG CGCCCGGGCG AGGGCTGCGC GCTCTGGCCG
CTGTTCGAGG CATTGGCCCA GCCGCAACTG CCGGTGGCGC GGCTGATCGA GACCACGAAC
GGCCACCGCT TCTCTGCCTG GGCGGTCGCC GAACGGCTGC TGCCCATGGG TTTCGGCGGC
CCCGCGCTCA GCCGCGCGCA GATGCTGATC CGCCCCGCAC CGGGCCGCGA CGGCCGCCCG
GCGCTGGGGG TGGGGCCGGC CTGCCGCATC TGTCCCCGTC CCGACTGTGC CGCAAGGCAC
GAACCCTCGA TCCTGGGGCC AGCCTGA
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| Protein sequence | MPRSLPRHPV ARPLIGTRIR ERRLSLGRRQ TEVARRAEIS AAYLNLIEHN RRPVGEELLS
RLADALEIDA TELASDREEA LIGALREAAA RAADQPGATV ELDQIAEFAA RFPGWASALA
GVTRRADALE RRLIALSDRM TRDPYLLATL HEVQSAVTAL RSTASILAET PEIEPEWRDR
FHANLDSDSQ RLSRTAQSLV AYLDSFEDEA VPMSPREEVE AWIAAGQPEP AEATELASDA
ARVLAQDLLA AQARDRAALP DAALAAAVDE AGEAADDPAV IAAILGQPLD LVLRRLGMLR
PGAWAQAGLV VCDGSGATLF RHAAPGFELP RPGEGCALWP LFEALAQPQL PVARLIETTN
GHRFSAWAVA ERLLPMGFGG PALSRAQMLI RPAPGRDGRP ALGVGPACRI CPRPDCAARH
EPSILGPA
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