| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1778 |
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| Symbol | |
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| ID | 4580962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1769921 |
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| End bp | 1771135 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639769095 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_915571 |
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| Protein GI | 119384515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.660768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CGATTGCTCG ACCGTTCCGC AGGCAATCCC TGCCGGAATT CATCGCGATG
CTGGCGCTGA TCTTTGCCGT CATCGCCTTC TCTATCGATT CCATGCTGCC GGCGCTGCCC
GAGATCGCGG CGGCCCTGAC GCCCGGGAAC GTCAACCGCG CACAACTCGT CCTGACCTCC
TTCGTCGGCG GCCTGGGGCT GGGGCTGTTC GTCGGCGGTC CGCTTTCCGA CGCGCTGGGG
CGCAAGCCGG TCATCATCGC CGGTTTCGCG CTTTACGCCC TGGCGGCCGT CGCCGCGGTC
TTTGCCGATT CGCTGGAGCT GCTGCTGGCG GCGCGTTTCG TGCAGGGCAT CGGTGCCGCC
GCCCCGCGCA TCGTGGCGCT GGCCATGGTG CGCGACCTGT ATCAGGGGCG CGAGATGGCG
CGGATCACCA GTTTCGTCAT GATGATCTTC ATCCTGGTGC CCGCGGTCGC GCCTTCGATC
GGCGCGGTGA TCATTCATTT CGTCGGCTGG CGCGGGGTGT TCGGCTCTTT CGTCGTGCTG
GCGCTGATCG GCAGCCTGTG GCTGAACCTG CGCTGCCCCG AGACCCTGCC CGAGGCCGTG
CGCCGGCCCT TGAACCTGCG CAGCCTGGCC GCTGCCGCGC GCGAGGTCAT GGGCAACAGG
CAGGTGCAGC TGGTGACGGT GGTGATGACC CTGGGCTTCG GGCAGATGTT CGCGCTGCTG
AGTTCGGCCC AGCAGCTTTT CTCGGACACC TATGGCAAGG GCGAAAGCTT CCCGCTGTGG
TTCGCCGCGA TGGCGCTGCT GTCGGGCAGC GGGACGGTGC TGAACGCGCG CTATGTCATG
CGGCTGGGCA TGCGGCGGAT CGTGGGCTGG GCCTATGGCA TGCAGGTGCT GGTTTCGGGC
GTGATGTCGG TTCTGGTGTT TGGCGACCTG CTGCCCGAGG CGCTGCGCTT TCCGGCCTTC
TTCTTCTGGG CGGTCAGCGT GTTTTTCATG GCGGGCGTGA CCTTCGGCAA CCTGAACGCC
ATGGCGTTGC AGCGCATGGG CCATGTGGCG GGGATGGCGG CCTCGGTCAT CGGGGCGCTT
TCGACGCTGG GGGCGGTGCT GATCGCGGCG CCGGTCGGGC TGCTCTATGA CGGCACGGCG
CGGCCCATCG TCCTGGCGAC GCTGGTCTGC TCGGCGCTGG CGCTGGCGCT GATGCGCCAT
GTGCGCGAGC ACTGA
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| Protein sequence | MSDPIARPFR RQSLPEFIAM LALIFAVIAF SIDSMLPALP EIAAALTPGN VNRAQLVLTS
FVGGLGLGLF VGGPLSDALG RKPVIIAGFA LYALAAVAAV FADSLELLLA ARFVQGIGAA
APRIVALAMV RDLYQGREMA RITSFVMMIF ILVPAVAPSI GAVIIHFVGW RGVFGSFVVL
ALIGSLWLNL RCPETLPEAV RRPLNLRSLA AAAREVMGNR QVQLVTVVMT LGFGQMFALL
SSAQQLFSDT YGKGESFPLW FAAMALLSGS GTVLNARYVM RLGMRRIVGW AYGMQVLVSG
VMSVLVFGDL LPEALRFPAF FFWAVSVFFM AGVTFGNLNA MALQRMGHVA GMAASVIGAL
STLGAVLIAA PVGLLYDGTA RPIVLATLVC SALALALMRH VREH
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