Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1717 |
Symbol | |
ID | 4580979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1702840 |
End bp | 1704039 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639769031 |
Product | ABC branched-chain amino acid transporter, periplasmic binding protein |
Protein accession | YP_915510 |
Protein GI | 119384454 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.620152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAGT TTCTGCTGTC GACCGCTGCG GTCGGCCTTA TTGCCACGCC CGCCCTGGCC GAAGTCTCGG ACGGCAAGGT CAAGATCGGC ATCCTGAACG ACCAGTCCGG GGTCTATGCC GATTTCGGCG GCAAGTATTC CTATGAGGCC GCGCGGATGG CGGTCGAGGA TTTCGGCGGC AAGGTGCTGG ACGCGCCCAT CGAGGTCGTC ACCGCCGACC ACCAGAACAA GCCCGACATC GCCTCGAACA TCGCCCGGCA ATGGTACGAT ACCGAGCAGG TCGACACGAT CATGGAGCTG ACCACCTCGT CGGTCGGCCT GGCCGTGCAG GCGCTGAGCC AGGAAAAGAA GAAGATCACC GTCAACACCG GCGCGGCCAC GACCGAGCTG ACCGGAGCGC AATGCACGCC CTACGGCTTC CACTGGGCCT ATGACACCCA TGCGCTGGCC GTGGGCACCG GCGGCGCCTT GGTGAAGGAG GGCGGCGACA GCTGGTTCTT CCTGACTGCG GACTATGCCT TCGGCTATTC GCTGGAAGAG CAGACCGGCA ATTTCGTCAA GTCGCAGGGC GGCACGGTCG CGGGCGCGGT GCGCCACCCG CTGGCGACGA CGGATTATTC CTCGTTCCTG CTGCAGGCCC AGGCTTCGGG CGCCAAGGTG ATCGGCCTGG CCAATGCCGG CATGGACACG CAGAACGCCA TCAAGCAGGC GGCTGAATTC GGCATCACTG CCGGCGGCCA GCGCCTTGCG GCGCTGCTCT TTACCTTGGC CGAGGTGCAT GGAATCGGGC TGGACGCCGC GCAGGGGCTG ACGCTGACCG AAAGCTTCTA CTGGAACCGC ACGCCGGAAT CGCGCGAGTT CGGCGAACGC TTCAAGGAGC GGACGGGCGT CATGCCGAAC ATGGTCCATG CCGGCACCTA TTCGGCCGTC ACCCAATACC TCAAGGCGAT CGAGGCCGCG GGCACCGACG AAACCGAGGC CGTCGCCGCC AAGATGCACG AGATGCCGGT CGACGACGTC TTTGCCCAGG GCGGCAAGGT CGGGCCGAAC GGCCGGCTGA TCAAGGACGT GTATCTGATG GAGGTCAAGG CGCCCGGCGA CGTGACCGAG GATTGGGACT ACTACAACGT CCTGGCCACG ATTCCGGGCG ACGAGGCGTT CCTGAACCCG GCCGAAAGCG GCTGTCCTCT GGTCCAGTGA
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Protein sequence | MRKFLLSTAA VGLIATPALA EVSDGKVKIG ILNDQSGVYA DFGGKYSYEA ARMAVEDFGG KVLDAPIEVV TADHQNKPDI ASNIARQWYD TEQVDTIMEL TTSSVGLAVQ ALSQEKKKIT VNTGAATTEL TGAQCTPYGF HWAYDTHALA VGTGGALVKE GGDSWFFLTA DYAFGYSLEE QTGNFVKSQG GTVAGAVRHP LATTDYSSFL LQAQASGAKV IGLANAGMDT QNAIKQAAEF GITAGGQRLA ALLFTLAEVH GIGLDAAQGL TLTESFYWNR TPESREFGER FKERTGVMPN MVHAGTYSAV TQYLKAIEAA GTDETEAVAA KMHEMPVDDV FAQGGKVGPN GRLIKDVYLM EVKAPGDVTE DWDYYNVLAT IPGDEAFLNP AESGCPLVQ
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