| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1697 |
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| Symbol | |
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| ID | 4581323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1679875 |
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| End bp | 1681881 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769011 |
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| Product | transketolase |
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| Protein accession | YP_915490 |
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| Protein GI | 119384434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.473272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC AGATGGCAAG GATCGACACC GGGCAAGAGG CGCAGATGGC CAATGCCATC
CGCGCGCTGG CGATGGATGC GGTCGAGGCC GCGAAATCCG GCCACCCCGG CGCGCCCATG
GGCATGGCCG ACGTGGCCGC GGTGCTGTTC AACCGCTTCA TGAAGATCGA CCCTGCGGAT
GCGTCCTGGC CCGACCGCGA CCGTTTCGTG ATGTCGGCCG GCCATGGCTC GATGCTGGTC
TATGCGATCA ACCACATGCT GGGCTATGAC GACATGGACA TGGACCAGCT GCGGAGCTTC
CGCCAGTTGG GTGCGCGCAC CGCCGGCCAT CCCGAATACG GCCATGCCAA GGGCATCGAG
ACCACCACCG GCCCGCTGGG CCAAGGCATC GCCACCGCCG TCGGCATGGC GCTGGCCGAG
CGGATGATGA ACGCGCGTTT CGGCGACGAT CTGGTGGATC ACTGGACCTA TGTCATCAGC
GGCGACGGCT GCCTGATGGA GGGCATCAGC CACGAGGCCA TCGACTTTGC CGGCCACCAG
CAGCTTGGCC GGCTGATCCT CATGTGGGAC GACAACGGCA TCACCATCGA CGGCGGGACC
GACCTTTCGA CCTCGACCGA CCAGCAGGCG CGCTTTGCCG CTGCGGGCTG GCATGTGCAG
GCGGTGGACG GCCATGACCG CGAGGCGGTG GCCGCCGCCA TCGAGGCGGC GCGCGAAGAC
GACCGCCCCT CGCTCATCGC CTGCAAGACG GTGATCGGCT ATGGCGCGCC GAACAAGCAG
GGCAGCCACG ACGTGCATGG CGCGCCGCTG GGCGCCGACG AGATCGCCGC CGCGCGCGCG
CATCTGGGCT GGAGCCATCC GCCCTTCGAA ATTCCCCAAG ACATCCTGGA CTCCTGGCGC
TCTGTCTCCG CGCGAGGGGC CGAGGCGCGG TCGGCCTGGC AGAAGCGGTT GGAAACGTCC
CCAGATCAGG GCCGCTTCAA CGCCATGCTG GCCGCGCCCG ATGCGGCGGC GCTGCGCAGC
GCCATCCGCG ACCATACGGC AAAGCTGGCG GCCGACCGGC CCAAGGTCGC GACCCGCAAG
GCGTCCGAGA TGGCACTGGA GGTGGTGAAC GCCACCCTGC CCAACACGGT GGGCGGCTCG
GCCGACCTGA CCGGCTCGAA CAACACCCGC AGCAAGGGCA TGGCCTCGGT GACACCCGGC
GACCGCAGCG GCCGCTATGT CCATTACGGC ATCCGCGAGC ACGGCATGGC CGCGATCATG
AACGGCATCG CGCTGCATGG CGGGCTGGTG CCCTATGGCG GCACCTTCCT GGCCTTCAGC
GACTATTCCC GCCCGGCGAT CCGGCTGGGC GCGCTGATGG GGGTGCCGGT CGTCCATGTC
ATGACCCATG ACAGCATCGG GCTGGGCGAG GACGGCCCGA CCCACCAGCC GGTCGAGCAT
GTCGCGGCGC TGCGGGCGAT CCCGAACCTG ATGGTGTTCC GCCCCGCCGA TGCGGCCGAG
ACCGCCGAAA GCTGGGAGAT CGCGCTGACC GCGCCCGCCA GCCCTTCGGT CCTGTGCCTG
TCGCGCCAGA ACCTGCCTGC CGTGCGGCTG GAGGCCGGCG ACGACAACCT GACCCGGCAG
GGCGCCTATG TCCTGCGCGA GACCGAGGGC GCGCGCGACG TGACGCTGAT CGCCACCGGC
TCCGAGGTCG AGATCGCGCT GGAGGCCGCC GACCTGCTGG CCGCGCAGGG CGTGCGCGCC
GCCGTCGTCT CGGCCCCCTG CTTCGAGCTT TTCGCCGCGC GCCCGCAGGC CGAGCGCGAG
GCCGTGCTGG GCCGCGCCCC GCGCATCGGC GTCGAGGCGC TGATCCGGCA GGGCTGGGAC
GGGCTGATCC TGCGTCCCGG CGACGGCTTC ATCGGCATGG CGGGCTTTGG CGCCTCGGCC
CCTGCCCCCG CGCTTTACCG GCATTTCGGC ATCACCCCCG AACGTGCCGC CGACCTTGCC
AACCAGCTTA TCCAGGGAGG AAAGTGA
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| Protein sequence | MMNQMARIDT GQEAQMANAI RALAMDAVEA AKSGHPGAPM GMADVAAVLF NRFMKIDPAD
ASWPDRDRFV MSAGHGSMLV YAINHMLGYD DMDMDQLRSF RQLGARTAGH PEYGHAKGIE
TTTGPLGQGI ATAVGMALAE RMMNARFGDD LVDHWTYVIS GDGCLMEGIS HEAIDFAGHQ
QLGRLILMWD DNGITIDGGT DLSTSTDQQA RFAAAGWHVQ AVDGHDREAV AAAIEAARED
DRPSLIACKT VIGYGAPNKQ GSHDVHGAPL GADEIAAARA HLGWSHPPFE IPQDILDSWR
SVSARGAEAR SAWQKRLETS PDQGRFNAML AAPDAAALRS AIRDHTAKLA ADRPKVATRK
ASEMALEVVN ATLPNTVGGS ADLTGSNNTR SKGMASVTPG DRSGRYVHYG IREHGMAAIM
NGIALHGGLV PYGGTFLAFS DYSRPAIRLG ALMGVPVVHV MTHDSIGLGE DGPTHQPVEH
VAALRAIPNL MVFRPADAAE TAESWEIALT APASPSVLCL SRQNLPAVRL EAGDDNLTRQ
GAYVLRETEG ARDVTLIATG SEVEIALEAA DLLAAQGVRA AVVSAPCFEL FAARPQAERE
AVLGRAPRIG VEALIRQGWD GLILRPGDGF IGMAGFGASA PAPALYRHFG ITPERAADLA
NQLIQGGK
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