Gene Pden_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1655 
Symbol 
ID4580837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1637085 
End bp1637708 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID639768969 
Productelongation factor P 
Protein accessionYP_915448 
Protein GI119384392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.668126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGACT TCGTATCCGG CCCCCCGGAA TTTGAAAAGC AGGCAAGGGA AACCGCCTTG 
AAAGTCATCG CCTCCAGCCT TCGCAAAGGC AATGTCGTCG AGATCGACGG CAAGCTCCAT
GTCGTCCTGA CCGCGACCAA CTTCCACCCC GGCAAGGGCA CGCCGACGAC GCAGGTCGAC
CTGCGCCGCA TCTCGGACGG CAACAAGGTC TCGGAACGCT GGAAGACCAC CGAACAGGTC
GAGCGCGCCC ATGTGGATGA ACGCGCCTAT AATTTCCTTT ACGAGGACGG CGAAGGCTTC
CACTTCATGG AGCCGGAAAG CTATGAGCAG GTCGTGGTCT CGCCCGACGT GGTCGGCGAC
GACAAGGTGT TCCTGGAGGA CGGCATCAGC GTCTTCCTGC AAGTCCACAA CGGCGTCGTC
ATCGCGCTCG AGCTGCCGCA GAAGGTCACC GTCGAGGTGG TCGAGACCGA GCCGGTGGTC
AAGGGCCAGA CCGCCTCGTC CAGCTACAAG CCGGCGATGG CGCATAACGG CGTGCGCATC
ATGGTGCCGC CGCATATCGG CGTGGGCACC AAGGTGATCA TCAACACCGC CGACCTGACC
TATGTCGAGC GCGCCAAGAG CTGA
 
Protein sequence
MPDFVSGPPE FEKQARETAL KVIASSLRKG NVVEIDGKLH VVLTATNFHP GKGTPTTQVD 
LRRISDGNKV SERWKTTEQV ERAHVDERAY NFLYEDGEGF HFMEPESYEQ VVVSPDVVGD
DKVFLEDGIS VFLQVHNGVV IALELPQKVT VEVVETEPVV KGQTASSSYK PAMAHNGVRI
MVPPHIGVGT KVIINTADLT YVERAKS