| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1631 |
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| Symbol | |
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| ID | 4581011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1612232 |
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| End bp | 1614451 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768946 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_915425 |
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| Protein GI | 119384369 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.371565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCT TCGTATCCAG ATGCCGGGTT TCGGCGTTTC GGCTGGTCGC ACTGTTGTGG
CTGGGCTGCG CCGCGATCCA GATGCCCGTT GCGGCGGCGG AATACGAATT CGACATTCCG
GCGCAGCCGC TGGCGCGGAC GATCAACCGC ATCGGGCAGG TCGCCGGTCT TTCCGTGCTG
ATCAAGGGGA ACGCCCCAGA CCTCGCCGGT CCACCGCTTT CGGGGCGCAT GACGCTGGAC
GCAGCCTTGC GCACGGTGCT GCAGGAAGGG CGGGGCCGCT ATCGCTTTAC CCCCCAGGGC
AGCCTTGTCG TCGAACTGCC GGAGCCGCCC GATCCGGCCA CGCCCTCGCC CGACCCGACG
GTCACGCTTC AGACGGTGGT GATCACCGCG GCCGGTCATG CCCAGCAACT GGCCGATGCC
CCGGCGACGA TGACCGTCAT CGAGGCGCAG GAACTGGCAG GCCGCCCGAC CCCGACGCTG
GCCGAGGCGC TGCGCGGGGT GCCCGGCCTG CATGTGGGCG CCCCCGGCCG CGACGGCGGC
ACGCCGATCA CCCTGCGCGG CATGGGACAA TCCCATGTGC TGTTCATGAT CGACGGCAAG
CCGCTCAGCG CCTCCGAGGA GGCGGCCTAT AACGGCCGCG GCCTGGGCGC CAAGGCAGGC
TTCCTGCCGC CGATCCCGGC CATCGAGCGG ATCGAGGTGA TCCGCGGCCC GATGTCCGCG
CTTTACGGAT CGGCCGCCTC GGGCGGCGTG ATCAATGTCA TCACGCGGCC GGTTCCCGAT
GCCTGGACGG GCAGCCTGGA TCTTGGCCTG ACGCATGATC CCGGCCCCGG TTCCGGGGCT
GAGCGCGAGG CCCGCTTCAT GCTGGGCGGG CCGCTGCTGC GCGACCGGCT GGGGCTGATG
CTTTACGGTT CGCACAATCG CCGCGAGGGG GCGGGCCTGC CCCCGCCCTA CGAGGACGGC
ATCAGCGAGC GGGTCAACCT TGGCGGCAGG CTCGGCTGGA ATCCGGCCAC GAACCAGTCC
GTGGAGCTGG ATCTATGGGG CAGCCGCTTG CGCCTGCGCG GCAATGCGCC CGACCCCGCC
GCCTTCGATA CCCGGATACG CGACCGGGGC AGCAGCCTGA CCCATCGCCT GCACTGGGGT
GAACGGGCCG AGACCGTATC CTTCCTGTTC CGCGAAACCA CGGATTTCGA TGCCGGCAAC
CAGAGCGGCC ATGAGGCGCT GACCTTCAGC ACCCGCTCGT CCCTGCCCTG GGGACGGCAT
CACCTGACCT TCGGGCTTGA GCAACGGCGC GAACGCACGC GGCACGACCC CGACCGCCTG
CCCGATTCCG CCGTCACCGA TCTCGACCGC TGGCACCGCG CGCTTTATGG CGAGGGCAGG
TTCGCGCTGT CCTCCGACCT GACCCTGACC CTTGGCCTGC GCCATGACCG CAACGAGAAA
TACGGCGCGC AGCTGACGCC CAGGGCCTAT GCGGTATGGC GCCCCCTGCC CGGCCTGACC
GTCAAGGGCG GGCTTGGCAG CGGCTATCGG GTGCCGGCGT TGAAACAGGC CGACGACGAT
GTCTGGGAGC CCTCGGGCGG CGACGGCCGA TCCCGCGACC GGGGCAACAG CGCCCTGAGG
CCCGAGCGGA GCAGGAATTA CGAACTCGGC CTGATCTGGG AGGCGCCGGG CGGCATCCAG
ATCGGGGCGA CCGCGTTTTA CACGCGCTTC CGGGACCGTA TCGGCCGTGC CGACCTGTGC
CGCACGCCGG CGGGTCAGGC CCCCTCCTGC GTGCTGAACG GCGCGCATCA TGTGGCGGTC
ACGCAATACC GCAACGAAGG CGAGGCCCGG CTGCGCGGTG CGGAACTTAC GCTCGACATC
CCGTTGGATG ACATGACGCT TTCGGCGAAT TACACATGGT CGGATTCAAG GATCACCAGC
GGCCCGAACG CCGGGCGGCC GTTTCACAAC CTGCCCCGGC ACATGCTGAA CCTGAGCCTG
GACTGGCAAC CGGCCGAGGC GCTGAACCTT TGGGCGCGCG CGCGTTACCG CAGCCGATCC
GAGGCGCTTG GACGGAGCGC CGGCCTGCAA AGCCATCTGA TCGTCGATCT TGGCCTGGAC
TATCGCCTGC GCGACGGCGT GACCGGCACG CTCGGCATCT ACAATGCCGC GGATGTGGTG
CCGGACGAAA ACGCCGTGGA TGGGCGGCGG CTCCATATCG GGCTCGGCAC GTCGTTCTGA
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| Protein sequence | MSSFVSRCRV SAFRLVALLW LGCAAIQMPV AAAEYEFDIP AQPLARTINR IGQVAGLSVL
IKGNAPDLAG PPLSGRMTLD AALRTVLQEG RGRYRFTPQG SLVVELPEPP DPATPSPDPT
VTLQTVVITA AGHAQQLADA PATMTVIEAQ ELAGRPTPTL AEALRGVPGL HVGAPGRDGG
TPITLRGMGQ SHVLFMIDGK PLSASEEAAY NGRGLGAKAG FLPPIPAIER IEVIRGPMSA
LYGSAASGGV INVITRPVPD AWTGSLDLGL THDPGPGSGA EREARFMLGG PLLRDRLGLM
LYGSHNRREG AGLPPPYEDG ISERVNLGGR LGWNPATNQS VELDLWGSRL RLRGNAPDPA
AFDTRIRDRG SSLTHRLHWG ERAETVSFLF RETTDFDAGN QSGHEALTFS TRSSLPWGRH
HLTFGLEQRR ERTRHDPDRL PDSAVTDLDR WHRALYGEGR FALSSDLTLT LGLRHDRNEK
YGAQLTPRAY AVWRPLPGLT VKGGLGSGYR VPALKQADDD VWEPSGGDGR SRDRGNSALR
PERSRNYELG LIWEAPGGIQ IGATAFYTRF RDRIGRADLC RTPAGQAPSC VLNGAHHVAV
TQYRNEGEAR LRGAELTLDI PLDDMTLSAN YTWSDSRITS GPNAGRPFHN LPRHMLNLSL
DWQPAEALNL WARARYRSRS EALGRSAGLQ SHLIVDLGLD YRLRDGVTGT LGIYNAADVV
PDENAVDGRR LHIGLGTSF
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