Gene Pden_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1623 
SymbolflgD 
ID4581004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1604147 
End bp1604812 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content50% 
IMG OID639768939 
Productflagellar basal body rod modification protein 
Protein accessionYP_915418 
Protein GI119384362 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATGA ACACCTCTTC TGTGACTGGC AATGTATATG AAGGCGGATC CCAGTCCTTC 
AGTGCGCCAT CCGAGTCTGG CTCTGCAGAT CAATTCGAAA TGTTCCTGAA GATGCTGACG
ACACAAATCA AGAATCAGGA TCCGCTCAAT CCGATGAATA GCACCGATTT TGCGGTTCAG
CTTGCAACCT TTTCTGGAGT TGAGCAACAA GTTCAAACAA ATCTCCTGTT AACGCAACTT
TTGCAAAATA TCAACGGCGG TGAGCTGGGC CAGTTTTCCA ACTGGATCGG CCGTGAGGTT
CGGACGACCT CTCCTGTGTG GTTTGATCAG ACACCCTTGA CACTGGAGAT AGAAGGCACT
GCCGATGCCG AAACTGCATT TCTTGTTACC CTTGACGACC AAGGCAACGA AGTTCTTCGG
CAAAGCACAG GAGCAATTTC AGGAGAGGTG AGTTGGCACG GCGAGGATCC AAGTGGCAAT
ATGCTTGCGA CTGGATTTTA TAGCTTTCGC CTTGAGGAGA TGAAGGACGG CAGAAGCCTT
GCTCCAAGAG ATGTTGCGGC ATATAGTAGA ATAACGGGTG TCGAGTTGAG CCGGAACGGT
CCTGAATTGA TCCTCCTCGG TGGCGGCTCA GTAAGGGTTG ATACGGTTAC TGCCTTGCGC
GAATAA
 
Protein sequence
MDMNTSSVTG NVYEGGSQSF SAPSESGSAD QFEMFLKMLT TQIKNQDPLN PMNSTDFAVQ 
LATFSGVEQQ VQTNLLLTQL LQNINGGELG QFSNWIGREV RTTSPVWFDQ TPLTLEIEGT
ADAETAFLVT LDDQGNEVLR QSTGAISGEV SWHGEDPSGN MLATGFYSFR LEEMKDGRSL
APRDVAAYSR ITGVELSRNG PELILLGGGS VRVDTVTALR E