| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1608 |
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| Symbol | |
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| ID | 4580215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1590526 |
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| End bp | 1592076 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768925 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_915404 |
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| Protein GI | 119384348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.161051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.561941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCC TTTTCCGCAT TGCGCTGCTT ACGCTGGCCG CCCTGCTTTC CGCCCCGGTC
CTGGCCCAAG AGGACAGGCC GCTGATCATC ACCGACAGCA GGGCCGACCG CGGCATGCTC
GCGCCCTATC TGCACACGCG CAACGGCATC GCCTATCTCT ACATGACCTA TGTCTTCGAC
AGCCTCGTGT CGCAGGACCG GCAAGGCCGG CCGGCGCCGG GACTGGCCGC CAGCTGGACG
ATCTCGGCGG ACGGGCTGAC CGCCGATCTG CAGATGGACG GCCGCGCAAG TTGGCACGAC
GGCAGGCCGG TGACGGCTCG GGACGCCGCC TTCACCTTCG CCTATATGGC GCGCCACCCC
TATCCCTTCG TCACGCTGAA GAATGTCGCC GGGGCCGAGG CGCTGTCGGA CCGGCACCTG
CGCATCACGC TGAAAAGCCG GGATGCGGGG CTGGTTTCGG GCCTGCTCAC GGCGCTGCCG
ATCCTGCCCG AGCATGTCTA TGCCGCCGAG GACGCGCCCG AACGCTTTAC CGCGCCCGAG
GCCGCGACCG GCAGCGGCCC CTATCGGCTG GCCAGCTATG ACAAGGCGCA GGGCCGCTAC
ATGCTCGAGG CGGTGCCGGA CCATTACGCC GGCGCGCCGA AATTCACCCG GCTGATGATC
GTCACGATGG CGCCCGATGC CGCGATCCGC GCCCTGCGCG GCGGCGAGGT GGACGTGATC
TCGGACCTGC CGGTCGAGCG CGCCGCGGGG GTCGAGGCGC AGGGGCTGCA TGTCGTCCGG
GCGCGCAGCG GGCATGTGAC CAAGATCGCC TTCAACCACC AGGGCATGTT CGGCGCCCGC
ACGCTGCGCC AGGCGCTGGC CCAGGCACTG GACCGGCTGG CGATCCTTGA CATCACCGCA
CCGAACGGCG CCGGCGCGCT GGCCGAGACA GGCTATTTCC AACAGGGCTC GCCCTGGCGC
GAGGACCGCA CCGATCCGGT CTGGCCGCAC GATCCCGCCA TCGCGGCGAC GCTGTTCGAG
GCGCAGGGCT TCGCGCGTAA CGGCACGGGC CGATGGCAGC GGGACGGCGC CCCGGTCACG
CTGCGGTTGA TCTCGGACGA AAGCCAGGCG CGGGTGGCGC AGGTCGTCGC CGACCAGCTC
GAAGGCTTCG GCTTCGGCGT GGAGCTGCGG CTGATGGAGC GCACCGCCCT GCAAGCGGTC
CCGCCCGGCG GCGATTACGA CCTGCTCATC GCCTCGGTCA GCACCACCGG CGACCCGGGG
GACATCGCCA GCCGCGTCAC GGGCGACGCG TGGAGCGCCG ACCGCTATGC CGGGGACGGC
CGCATCGCCG CCGCGCTCGA GGCCGCCCGG CAAGCCGCCA CGCCCGAGAA GCGGCTGGCA
CATCTGCGCG CCTTCCAGCG GCTCTATGCC GAGGAACTGC CCTCGCTGAT GCTGATCGAC
CCGGTGATGG CCTCGGCCCA TGGCGGGCGG ATCGCGCTGG AGTTCATGCC CGACGGGGCG
CGGATCGGCA TTCCTACCGC CATAGACAAG TCGGCCTTCC TGCCGGAATG A
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| Protein sequence | MSGLFRIALL TLAALLSAPV LAQEDRPLII TDSRADRGML APYLHTRNGI AYLYMTYVFD
SLVSQDRQGR PAPGLAASWT ISADGLTADL QMDGRASWHD GRPVTARDAA FTFAYMARHP
YPFVTLKNVA GAEALSDRHL RITLKSRDAG LVSGLLTALP ILPEHVYAAE DAPERFTAPE
AATGSGPYRL ASYDKAQGRY MLEAVPDHYA GAPKFTRLMI VTMAPDAAIR ALRGGEVDVI
SDLPVERAAG VEAQGLHVVR ARSGHVTKIA FNHQGMFGAR TLRQALAQAL DRLAILDITA
PNGAGALAET GYFQQGSPWR EDRTDPVWPH DPAIAATLFE AQGFARNGTG RWQRDGAPVT
LRLISDESQA RVAQVVADQL EGFGFGVELR LMERTALQAV PPGGDYDLLI ASVSTTGDPG
DIASRVTGDA WSADRYAGDG RIAAALEAAR QAATPEKRLA HLRAFQRLYA EELPSLMLID
PVMASAHGGR IALEFMPDGA RIGIPTAIDK SAFLPE
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