| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1560 |
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| Symbol | |
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| ID | 4580862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1532685 |
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| End bp | 1534676 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639768876 |
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| Product | capsule polysaccharide biosynthesis |
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| Protein accession | YP_915356 |
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| Protein GI | 119384300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.025532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0249289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCCA AGGACAGGGC CGCCGGGGAT TCCCGGCGGC TTTTCATATG CAGCGCCGGT
TTCCTGACCC GCCCGCGCTT GCGCCGCATC CTGCAACTGG CCGGTTGGTC GCCGCGCATC
GGCCTGCCCG GCCCCGGCGA TCATGTCGGC ATCTGGGGCA ACAGCCCTGT CGCCTGGCGC
GGCAAGGCCC TTGCCGCCCG GCGCGGTGCC GGGCTGGTGC GGGTCGAGGA TGCCTTCCTG
CGCTCGATCC TGCCGGGGCG GGCGCGCGGG CCGGTGGCCC GGCGTGGTCC CATCGGGTTG
CTGATCGATC CCGTCGGGCT GCATTTCGAC CCCGAGGCGC CCTCGCTGAT CGAAACCCTT
GTCCACGCGA CCGAAACCCG CTCGCATCTG GACCGGGCCC GGCAGGGGAT TGCGCGGCTG
ATCGCCGCGG ACCTGTCGAA ATACAATGCG CATCTGCCGC AGGTCGCGCC GCCCGCACCC
GGCTATGTTC TGGTCATCGA CCAGACCCGC GGCGACGCCT CGCTGCTGGG GGCCGGCCGC
GCTGATTTCC TGGAAATGCT GGCCGCGGCG CGCGACGAAA ACCCCGGCCT GCCGCTGGTG
CTCCGCAGCC ATCCAGAAAC GGCGCGCGGC CTGCGCCCCG GTCATTTCAC CCAGCAGGAC
CTGCGCCCGG GCGAGACGTT CTGCGACGGT GCCGTCTCGC CCTGGGCGCT GCTGCGCGGG
GCGGCGCGGG TCTATGCGCT GTCCTCGCAA CTCGGCTACG AGGCGATGCT GGCCGGCCAC
CGGCCGCGTG TCTTCGGCCG CCCCTTCTAT GCCGGCTGGG GGCTTTCGGA CGACCAGCAC
CCCCTGCCGC GCCGCAGCCC GGCCGGCATC GAGCAGCTTT TCGCCGCCAG CCACCTGCTC
GCGCCGGTCT GGTATGATCC GTGCCGCGAC CGGCTGACCG ATTTCGAGGG CGCGCTGGAC
CAGATCGAGG CCGAGGCCCG CGCCTGGTGC CAGGATCATG CCGGGCATCT GGCCTATGGC
ATCCGGCTGT GGAAACGCCC CTTCATGGCG CGGTTCTTCG GCTGCGGCGG CGGGGTGCGT
TTCGCTGCGA AACCCGGGCC GGGCGTGACC ATGGCCTGGG CCAACCGCGC GGCCGAAACC
TCCGGCGCGC TGCGCATCGA GGACGGCTTC CTGCGTTCGC GCGGGCTGGG CGCCGCACTG
GTGCCGCCGC TGTCGCTGGT CGCCGACGAT CTGGGCATCT ATTACGACCC CGGCCGCGAA
AGCCGGTTCG AGCGGCTGAT GACCCAGCCG CTGCCCCCCG GCGGGCACGC GCGCGCGCTG
CGGCTTGGCC GCCATCTCGT CGAATCCGGC ATCACCAAAT ACAACCTTGC CGGCCCGCCG
CCCGTGCTGC CTCCGGGTCA TCGCATCCTG GTGCCGGGCC AGGTCGAGGA CGATGCCTCG
ATCCGCCTCG GCGCCGGGGA TGTGCGCACG AACCTTGCCC TGCTGGAACG CGCCCGCGCG
GAAAATCCTC AGGCCGTGCT GATCTACAAG CCGCATCCCG ATGTCGAGGC CGGGCTGCGC
CCCGGCCTGA TCCCCCAAGC CGAACTGAGC CGGCTGGCGG ATGTCGTGGC CCGCAACACC
GCCGCCGATG CGCTGATGGG TCAGGTGGAC GAGGTCTGGA CCATGACCTC GACCCTGGGT
TTCGAGGCCC TTTTGCGCGG CCTGCCGGTG ACCACGCTGG GCGCCCCCTT CTATGCCGGC
TGGGGGCTGA CGCGCGACCT TGGGCCGGTG CCGGCACGGC GGCAGGCCCG GGCCGATCTG
GCAAGACTGA TCCATTGCGC CCTGATCGCC TATCCGCGTT ATTTCGACCC GGCAAGCGGC
CTGCCCTGCC CGCCCGAGAT CGCCGTGGAA CGGCTGCGCG ATCCGGCATT CGCCGCAGGC
GGCCCGGGGC TGCGCTGGCT GGCCAAGGCG CAGGGCGCGC TGACCGGCCA TGCCTGGCTC
TGGCGGCGCT AG
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| Protein sequence | MHPKDRAAGD SRRLFICSAG FLTRPRLRRI LQLAGWSPRI GLPGPGDHVG IWGNSPVAWR
GKALAARRGA GLVRVEDAFL RSILPGRARG PVARRGPIGL LIDPVGLHFD PEAPSLIETL
VHATETRSHL DRARQGIARL IAADLSKYNA HLPQVAPPAP GYVLVIDQTR GDASLLGAGR
ADFLEMLAAA RDENPGLPLV LRSHPETARG LRPGHFTQQD LRPGETFCDG AVSPWALLRG
AARVYALSSQ LGYEAMLAGH RPRVFGRPFY AGWGLSDDQH PLPRRSPAGI EQLFAASHLL
APVWYDPCRD RLTDFEGALD QIEAEARAWC QDHAGHLAYG IRLWKRPFMA RFFGCGGGVR
FAAKPGPGVT MAWANRAAET SGALRIEDGF LRSRGLGAAL VPPLSLVADD LGIYYDPGRE
SRFERLMTQP LPPGGHARAL RLGRHLVESG ITKYNLAGPP PVLPPGHRIL VPGQVEDDAS
IRLGAGDVRT NLALLERARA ENPQAVLIYK PHPDVEAGLR PGLIPQAELS RLADVVARNT
AADALMGQVD EVWTMTSTLG FEALLRGLPV TTLGAPFYAG WGLTRDLGPV PARRQARADL
ARLIHCALIA YPRYFDPASG LPCPPEIAVE RLRDPAFAAG GPGLRWLAKA QGALTGHAWL
WRR
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