Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1523 |
Symbol | |
ID | 4578981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1482702 |
End bp | 1483478 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639768838 |
Product | putative restriction endonuclease |
Protein accession | YP_915319 |
Protein GI | 119384263 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.74121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0967794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA CGCCCCAATC CTTCGTGACC CGCCAGGAAT GCGACAAAGT CACCTACCAG AACGGCTTCC GGCGCCCCCA AGGCGAAATC GATGGCTGGC AGCGGTACAG TTCGACGACC GCGCAGGGAT CGATCTGGCT CGCACGGGAC ACTTCCGGTG CGTGGCTCCT CGCCCTGGAT CACGCCGGAG TCATCGCAGA GATCGGGATT GAGGCGTCCG ATACCGCAGG ACCAGGCCTC GCACGGTTCC GGCTTGCCTC GCTGGCACTG CTTTATGGCG TGATGCCACG AGTTTACGAG CTTGCCGCAA GCCTTCCCGA CGCACCACTT CAGGAGTTTA TTCACCGCAC CAAGCACTTG CCGAAGACGA CGGAGGCGGA ACGCCTTGTG GTCCAGCGTG TCGGCCAGAA CATCTTTCGT GAGCGTCTGA TCAAATACTG GCGGGGGCGA TGCCCTCTTA CCGGGATTGT CGACAAGCCG CTTCTACGTG CCTCTCACAT CAAGCCATGG CGCGACTGTG AAAACGACGC AGAGCGTCTG GATGTCCATA ATGGTTTGCT TCTGTCGGCT CTTTGGGATG CCGTATTCGA TGGTGGTCTG GTTACCTTCG GTGATGACGG CATTCCGGTC TTTTCGGCGA ACCTCAGCGA GCAGGCACGT GCGCGACTAA GTTTTGATCG GCCAGTCGAT CTGACCGACA AGCATCGGGT CTTCTTGGAC TGGCACAGGA CGAAGGTATT CGACGTCAAA GCACCTGACG CCCCGCATGC TGATTGA
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Protein sequence | MIETPQSFVT RQECDKVTYQ NGFRRPQGEI DGWQRYSSTT AQGSIWLARD TSGAWLLALD HAGVIAEIGI EASDTAGPGL ARFRLASLAL LYGVMPRVYE LAASLPDAPL QEFIHRTKHL PKTTEAERLV VQRVGQNIFR ERLIKYWRGR CPLTGIVDKP LLRASHIKPW RDCENDAERL DVHNGLLLSA LWDAVFDGGL VTFGDDGIPV FSANLSEQAR ARLSFDRPVD LTDKHRVFLD WHRTKVFDVK APDAPHAD
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