| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1512 |
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| Symbol | |
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| ID | 4581108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1477126 |
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| End bp | 1478298 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639768827 |
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| Product | replication protein A |
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| Protein accession | YP_915308 |
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| Protein GI | 119384252 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.36789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG GACGCAGACC CCGTTCCGAG CGCGGGCAGC TCGATCTCTT CCGCGCGCTG
CCCGGGGATT TCGCCCCCAG AGATGCGCAG GACCTCATGG CCTACCCCTT CTTTTCTCTC
GCCAAGTCGA AACGGGTCGC ACCGATCGAC TTTGCCGCTG GCAGCGTCAG CATCCGGGTC
GAAGCGGTTC CCGATCACGG TATGGCCACG ATCTGGGATG CCGACATCCT GATCTGGGTG
GCGAGTCAGA TCGTCGAGGC GCGTGACGCT GGACTGCGCA CGTCCCGGCT GATGGCCGCC
ACCCCATATG AGATCCTCAC CTATGTCGGT CGCGGAACCA GTGCGCGGGA TTACCAGCGC
CTGAAGGCGG CGCTGGATCG TCTGCAGTCG ACAACGATCT CCACTTCGAT CCGGCAGCCG
GCTGAAGGAC GCCGGCACCG CTTCTCCTGG ATCAACGAAT GGCAGGAGCG CAGCGACAGG
GACGGGCGGC CGGATGGTAT CGAGCTGATC GTGCCCGACT GGTTTTACCA GGCGGTACTC
GACAATGCGC TGATCCTCAC CATCGACCGG GCGTATTTCG ACCTGACCGG TGGGCTTGAC
CGCTGGCTGT ATCGCCTGGT GCGCAAGCAC GGTGGCCGCC AGCGCGATGG CTGGCGTTTC
GACTTTCACC ATCTTCACCA GAAGTCCGGG GCACTGTCGC CCTTCAAGCG CTTCGCCTTC
GAGCTTCGCG ACATCATCCG GCGGCAGCCG CTGCCGGGAT ACACGCTCTT TCTCGAAACT
GAAGTTGGTG GTCGCAAGCT GCTGGCCTTC GAGCCTGCGC CGGGCTGTGG AAAACCTGTG
AATGCGCTCG TGCTATCGGG AACCCGGACT ATCGTGCCAT CAGGAACCGG GGTCTCGTGC
TATCAGGAAC CCAAACAGGG TGTAACGCAC AGAAGCAAAA GCGGAAATCT CTCCCTTAAC
TTAGAGTCTA ACAAAGACTC TAACTTTGAA GAGCGCGCAG ATGGTGTGGA GAACATCATC
CGCAGCGCAG CCGGGAGCCT TCGAAAGGCT GAGAAACCGG ACGCATCAAG CATGCCTGGC
GCTGCCGGAT CGTTCCGGGA CAGCCCCGCC TCCGACACTG TCAGTCGCCC CGTCTTGGCA
CGCCTGCCGC TCGATCTACC GGGAGATCGG TGA
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| Protein sequence | MTDGRRPRSE RGQLDLFRAL PGDFAPRDAQ DLMAYPFFSL AKSKRVAPID FAAGSVSIRV
EAVPDHGMAT IWDADILIWV ASQIVEARDA GLRTSRLMAA TPYEILTYVG RGTSARDYQR
LKAALDRLQS TTISTSIRQP AEGRRHRFSW INEWQERSDR DGRPDGIELI VPDWFYQAVL
DNALILTIDR AYFDLTGGLD RWLYRLVRKH GGRQRDGWRF DFHHLHQKSG ALSPFKRFAF
ELRDIIRRQP LPGYTLFLET EVGGRKLLAF EPAPGCGKPV NALVLSGTRT IVPSGTGVSC
YQEPKQGVTH RSKSGNLSLN LESNKDSNFE ERADGVENII RSAAGSLRKA EKPDASSMPG
AAGSFRDSPA SDTVSRPVLA RLPLDLPGDR
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