| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1477 |
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| Symbol | |
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| ID | 4580298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1438642 |
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| End bp | 1439331 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768792 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_915273 |
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| Protein GI | 119384217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0985827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT TCAGGCGTTC TGCCACGCAT TATGGCAAGA CACCTCAACC AGAGACGCCC
TATCAGAGGG CCGCGCAGGT CTGGGATGAG CGTATCGGCT CCGCCCGTGT TCAGGCCCGC
AACTGGCGCT ACATCGCCTT CGGCAGCCTG ATCCTGGCGG CGGGTTTTGC TGGCGCCCTG
GTCTGGCAAT CCGCGCGTGG CACTGTCGTG CCCTGGGTCG TTCAGGTCGA CGCGCTCGGC
GAGGCCCAGG CTGTCGTGCC AGCCTCCGCC GACTACGAGC CGACCGATCC GCAGATCGCC
TTCCATCTCG GCCGCCTCAT CGAACAGGTC CGGTCGATCC CTGCCGATCC GATCATCGTG
CGGCAAAACT GGCTGCGCGC CTATGAGTTC ACCACGGATC GAGGCGCGGC TGCGCTGAAC
GATTTCGCCC GCGCGAACGA CCCGTTCACA CGCGTCGGTC GTCAACAGAT CGCTGTCGAG
GTGTCCTCAG TCATCCGGGC CTCGCCGGGA TCGTTCCGCG TCGCCTGGAC CGAACGCCAC
TACGAGAACG GTCAGCTTTC CACGACCGAG CGCTGGACCG CGATCCTGAC CGTCGTGATC
CAGACCCCGC GCAGCGCCGA GCGCCTGCGC GCCAATCCCC TCGGAATCTA TGTCAATGCG
ATCTCCTGGT CGCGGGAAAT GAGCCAATGA
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| Protein sequence | MNLFRRSATH YGKTPQPETP YQRAAQVWDE RIGSARVQAR NWRYIAFGSL ILAAGFAGAL
VWQSARGTVV PWVVQVDALG EAQAVVPASA DYEPTDPQIA FHLGRLIEQV RSIPADPIIV
RQNWLRAYEF TTDRGAAALN DFARANDPFT RVGRQQIAVE VSSVIRASPG SFRVAWTERH
YENGQLSTTE RWTAILTVVI QTPRSAERLR ANPLGIYVNA ISWSREMSQ
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