Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1464 |
Symbol | |
ID | 4580285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1428263 |
End bp | 1429180 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639768779 |
Product | aminotransferase, class IV |
Protein accession | YP_915260 |
Protein GI | 119384204 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTG AAACCACGTT CGCGTCTCTT TCCCCTGGAA CCCAAACGAG TGAAGCGTGT CCCGTCTGGT TCGATGGGTC TCTGGTTCCA TCGCGACAGG CAAATGTGCA CATCCTGACC CATTCGCTGC ACATGGCTGG CGCAGTATTC GAAGGCATCA GGGCCTATGA CGGTCGGGTA TTCCTCGCCG AAGAGCATTT TCGGCGTTTT GAACGCTCCG CTGAAATCCT CGGCTACACG TTGCCCTGGA GCCTGGATGA GCTTATCGCG GCAACCGAAG CCGTCCTCTG GGCGGGTGGA TTGCTGGATG CCTATATCCG TCCCGTTGCC TGGCGCGGTA GCGAAAGCGT CTCGGTCTCC GGACAGGGGT GCCGGATCCA TACCGCCATC GCGGCCTGGG ACTGGCCAGT GGAGAGCGCC CTTGGGGATG GGACCGGCGG ATTGCGCCTG GTTCTGTCGG ATTGGCGGCG CCCCGCGCCC GATACGGCGC CGACCGCCTC GAAATGCTCG GGGCTCTACA TGACCGGAAC CTTGTCGCGG GCCGCAGCCG CCCGTAGCGG ACATGACGAT GCCCTCATGC TGGATATGGC AGGCCATGTC GCCGAAACCA CGGTGACGAA CATCGTCCTC GTCCGGAACA GAAGGCTTCT GTCTCCCCTT CCCACATGCT TTCTCGACAG CCTGACCAAG CGCCATGTCT TCGACCTTGC GCGGGACCTT GGCCTGTCGG TTCATGAAGG AACCGTCAGC CTCAACGATC TGGACGCAGC CGACGAGGTC TTCGTCACGG GCACGTCGGT CGAACTTCGC CCCGTGGTCT CGCTCGACCG CCCCGGCAAG CACAGCACAT GGCCTTTGGG GCCAATCACC ACGGCCCTGC GCGAGGCGTT CCGCGCCTCG ACCCGGGCTC ACGCGTAG
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Protein sequence | MSSETTFASL SPGTQTSEAC PVWFDGSLVP SRQANVHILT HSLHMAGAVF EGIRAYDGRV FLAEEHFRRF ERSAEILGYT LPWSLDELIA ATEAVLWAGG LLDAYIRPVA WRGSESVSVS GQGCRIHTAI AAWDWPVESA LGDGTGGLRL VLSDWRRPAP DTAPTASKCS GLYMTGTLSR AAAARSGHDD ALMLDMAGHV AETTVTNIVL VRNRRLLSPL PTCFLDSLTK RHVFDLARDL GLSVHEGTVS LNDLDAADEV FVTGTSVELR PVVSLDRPGK HSTWPLGPIT TALREAFRAS TRAHA
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