Gene Pden_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1464 
Symbol 
ID4580285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1428263 
End bp1429180 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID639768779 
Productaminotransferase, class IV 
Protein accessionYP_915260 
Protein GI119384204 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTG AAACCACGTT CGCGTCTCTT TCCCCTGGAA CCCAAACGAG TGAAGCGTGT 
CCCGTCTGGT TCGATGGGTC TCTGGTTCCA TCGCGACAGG CAAATGTGCA CATCCTGACC
CATTCGCTGC ACATGGCTGG CGCAGTATTC GAAGGCATCA GGGCCTATGA CGGTCGGGTA
TTCCTCGCCG AAGAGCATTT TCGGCGTTTT GAACGCTCCG CTGAAATCCT CGGCTACACG
TTGCCCTGGA GCCTGGATGA GCTTATCGCG GCAACCGAAG CCGTCCTCTG GGCGGGTGGA
TTGCTGGATG CCTATATCCG TCCCGTTGCC TGGCGCGGTA GCGAAAGCGT CTCGGTCTCC
GGACAGGGGT GCCGGATCCA TACCGCCATC GCGGCCTGGG ACTGGCCAGT GGAGAGCGCC
CTTGGGGATG GGACCGGCGG ATTGCGCCTG GTTCTGTCGG ATTGGCGGCG CCCCGCGCCC
GATACGGCGC CGACCGCCTC GAAATGCTCG GGGCTCTACA TGACCGGAAC CTTGTCGCGG
GCCGCAGCCG CCCGTAGCGG ACATGACGAT GCCCTCATGC TGGATATGGC AGGCCATGTC
GCCGAAACCA CGGTGACGAA CATCGTCCTC GTCCGGAACA GAAGGCTTCT GTCTCCCCTT
CCCACATGCT TTCTCGACAG CCTGACCAAG CGCCATGTCT TCGACCTTGC GCGGGACCTT
GGCCTGTCGG TTCATGAAGG AACCGTCAGC CTCAACGATC TGGACGCAGC CGACGAGGTC
TTCGTCACGG GCACGTCGGT CGAACTTCGC CCCGTGGTCT CGCTCGACCG CCCCGGCAAG
CACAGCACAT GGCCTTTGGG GCCAATCACC ACGGCCCTGC GCGAGGCGTT CCGCGCCTCG
ACCCGGGCTC ACGCGTAG
 
Protein sequence
MSSETTFASL SPGTQTSEAC PVWFDGSLVP SRQANVHILT HSLHMAGAVF EGIRAYDGRV 
FLAEEHFRRF ERSAEILGYT LPWSLDELIA ATEAVLWAGG LLDAYIRPVA WRGSESVSVS
GQGCRIHTAI AAWDWPVESA LGDGTGGLRL VLSDWRRPAP DTAPTASKCS GLYMTGTLSR
AAAARSGHDD ALMLDMAGHV AETTVTNIVL VRNRRLLSPL PTCFLDSLTK RHVFDLARDL
GLSVHEGTVS LNDLDAADEV FVTGTSVELR PVVSLDRPGK HSTWPLGPIT TALREAFRAS
TRAHA