| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1434 |
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| Symbol | |
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| ID | 4580489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1403811 |
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| End bp | 1405253 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639768750 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_915231 |
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| Protein GI | 119384175 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.515471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT GGGATAGGCC GGTTTTCGAC ATGCGCGAGC CTCTTGCCCT CGAGATGGAG
CCGGGCCACG ACGGCCCGCT TTTCCTCGCC ATTGCCGAGG CGATCACCCG TGACATCACC
CGCGGACGCC TGAAGCCCGG AGCGCGGCTG CCTGGCACGC GGGCGCTGGC GCGCGAGCTG
GGGGTCCATC GCAATACGGT GGATGCCGCC TATCAGGAGC TGCTGACCCA GGGCTGGCTG
CACGCGGAAC CGGCGCGAGG CACCTTCGTG GCGCAGGATC TGCCGCAGGG GATGCTGGTC
CGCAGACCCG TGCCCACGCC GATGGACCCG GTGGCGCCAC GCGCGGGGCT CGCGTTTAGC
GACGGCGCGC CGGACCCCAA GCTGGTGCCC GACAAAGCGC TGGCCCGGGC CTTTCGCCGG
GCGCTGCTGT CGCCGGTCTT CCGCGCCGGG GCGGATTACG GCGATGCGCG CGGCACGTCC
TCGCTGCGCG AGGCACTGGC AGGCTATCTC GCCACGGACC GGGGCGTAGT TGCGGAGCCG
TCGCGGCTGC TGATCGCGCG GGGCAGCCAG ATGGCGCTGT TCCTGGCTGT ACGGGCGGCG
CTGTCGCCGG GCGAGGTCAT TGCCGTCGAG GAACCGGGCT ATCCGCTGGC CTGGGAAGCG
TTCCGCGCAG CCGGGGCAGA GGTGCGGGGC GTGCCGGTGG ATGGCGGCGG CCTGCGTATC
GACGCGTTGG AGGCTGTGCT GGCTCGCGAT CCGCGCATCC GGGCGGTCTA TGTCACGCCG
CATCACCAAT ACCCGACCAC GGTGACCATG GGCGCGGCGC GGCGGTTGCA ACTGCTGGAG
CTGGCGCAGC GCCAGGGGGT CACGCTGATC GAGGACGACT ATGACCACGA GTACCGCTTC
GAGGGCCGCC CGGTGCTGCC GCTCGCCGCC CGCGCGCCCG AAGACCTGCC GCTGATCTAC
GTGGGCTCCC TGTCCAAGCT GCTCTCGCCG GGCATCCGGC TGGGCTATGC GCTGGCGCCC
GAGCCGTTGT TGACCCGCAT GGCCGAGGCG CGGGCCGCCA TCGACCGGCA GGGCGACGCG
CCGCTGGAGG CGGCGCTGGC GGAACTGATC CGTGACGGCG ATCTCGGCCG CCACGCTCGC
AAGGCGCGGC GGGTCTACCG GGCGCGGCGG GATCTGCTGG CGGCGCTGCT GGGGGAGCAT
CTGGCCGGGC GGGCGACATT CGATCTGCCC GCCGGGGGCC TTGCGCTGTG GCTGCGTTGC
GAGGGGAGAT CCGCCGATGA TTGGGCCAAG GCCGCTGGGC AAGCGGGGCT GACCCTACTG
CCGGGTATGC GCTTTGCGCT GGAGGGCCCG GCGCCGCAGG CCTTCCGTCT GGGCTATGCG
GCGCTGGACG AAGGGCAGAT CGCCCGGGCG GTGGAGATCC TCGCCCAGAG CGTTCCGGGC
TGA
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| Protein sequence | MNDWDRPVFD MREPLALEME PGHDGPLFLA IAEAITRDIT RGRLKPGARL PGTRALAREL
GVHRNTVDAA YQELLTQGWL HAEPARGTFV AQDLPQGMLV RRPVPTPMDP VAPRAGLAFS
DGAPDPKLVP DKALARAFRR ALLSPVFRAG ADYGDARGTS SLREALAGYL ATDRGVVAEP
SRLLIARGSQ MALFLAVRAA LSPGEVIAVE EPGYPLAWEA FRAAGAEVRG VPVDGGGLRI
DALEAVLARD PRIRAVYVTP HHQYPTTVTM GAARRLQLLE LAQRQGVTLI EDDYDHEYRF
EGRPVLPLAA RAPEDLPLIY VGSLSKLLSP GIRLGYALAP EPLLTRMAEA RAAIDRQGDA
PLEAALAELI RDGDLGRHAR KARRVYRARR DLLAALLGEH LAGRATFDLP AGGLALWLRC
EGRSADDWAK AAGQAGLTLL PGMRFALEGP APQAFRLGYA ALDEGQIARA VEILAQSVPG
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