Gene Pden_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1424 
Symbol 
ID4580479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1391595 
End bp1392215 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID639768740 
Productmethyltransferase type 11 
Protein accessionYP_915221 
Protein GI119384165 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.96391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA CCACACGAGA CTTCTGGAAT GACCGCTACC GCCAAAAGAC CGGCGAAACC 
TCTGGCAAGC CCGGCCTCGT TCTGTCCCAG TTCGCCGGTC CGCTGGCGCC GGGGCGTGCG
CTGGAGATGG GCTGCGGCCG GGGGGACGAC GCGCTCTGGC TGGCCCGGCA GGGCTGGCAG
GTGACGGCGG TGGACGTCTC TGCTGTGGCG CTCGCCTATG CGGCTGATAG CGCCAGCCGC
GCCGGACTGG CCGGGACGGT CCAGTTCGAA GAGCACGATC TGGCCGAAAC CTTCCCTGAA
GGCATGTACG ACCTCGTCGT GGTCAGCTTC CTGCAATCAC CGCGAGACTG GCCGCGCGCG
CGTGTGCTGG CCCGGGCGGC AGGCGCGGTG TCCACCGGCG GACACCTTCT GATCACTGAA
CACGCTTCGC ACCCGCCGGG ATCCAAGGCA ACCGAGGGCA CGATTTTTCC CACCGCTGAG
GAGACGCTGG CTTCGCTCGC GCTCGATCCC CGTCAGTGGC GGAGGCTTTG CGTCTGTGCC
ATCGCGCGCA TGGGAACCAG AGACGAAGTT CAGGGCGAAA CGGTCGAGGA CAACGTGATC
TTCATGGAAC GGCTGGGTTA G
 
Protein sequence
MHQTTRDFWN DRYRQKTGET SGKPGLVLSQ FAGPLAPGRA LEMGCGRGDD ALWLARQGWQ 
VTAVDVSAVA LAYAADSASR AGLAGTVQFE EHDLAETFPE GMYDLVVVSF LQSPRDWPRA
RVLARAAGAV STGGHLLITE HASHPPGSKA TEGTIFPTAE ETLASLALDP RQWRRLCVCA
IARMGTRDEV QGETVEDNVI FMERLG