Gene Pden_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1422 
Symbol 
ID4580477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1390072 
End bp1390542 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID639768738 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_915219 
Protein GI119384163 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.968203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG ATCTTCGTAT GTCCCGGATG CTGCACGTCT TGATCCACAT GGACCGACAT 
GTCGGGCGTG CCACTTCGGA ACAGATCGCG CAGATGATCT CGACCAACGC CGTGGTGGTG
CGCAGGATGA TGGCGGGGCT GCGCGAGCGG GGGATCGTGT CGTCGGAAAA GGGTCATGGC
GGTGGCTGGC AGCTTGCTTG CCCGCTGGCC GAGATCAGCT TGCGCGACGT CTACGAGGCG
GTCGGCCACC CGCCGCTGTT CAACATTGGA CCGCAGGCGG ATCCGTCGCC CTGTCTGGTC
GAGCAGGCGG TCGACGCGCG GCTCGATGCG ACGCTGGCAG AGGCCGAGAC ACGGCTGCTG
GCGCAATTCG CCGCGATCAC GGTGGAGGAG GTCGCGCAGG ATTTCGAGCG TCGTTTCGAA
GAAAGCGGCC ATACGGTGCC GTTCCCTTGG CATGGCGCGA CGGGGGAATG A
 
Protein sequence
MARDLRMSRM LHVLIHMDRH VGRATSEQIA QMISTNAVVV RRMMAGLRER GIVSSEKGHG 
GGWQLACPLA EISLRDVYEA VGHPPLFNIG PQADPSPCLV EQAVDARLDA TLAEAETRLL
AQFAAITVEE VAQDFERRFE ESGHTVPFPW HGATGE