Gene Pden_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1417 
Symbol 
ID4581282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1385572 
End bp1385904 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content67% 
IMG OID639768733 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_915214 
Protein GI119384158 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.718681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTGA CCCCCGCCTA TGCCCAGGCC GCCGGAGGCG CTTCCGGTGC CGCAGGACTC 
GCCTCGTTCC TGCCGCTCAT CCTGATCTTC GTCATCATGT ATTTCCTGAT GATCCGCCCG
CAGCAGAAGC GCATGAAGGA ACATCGCGCC ATGGTCGAGG CGCTGAAGAA GGGCGACGAG
GTCATCACCC AGGGCGGGCT GATCGGCAAG GTCACCTCGG TGCGCGAGGG CGAGCTGGAG
GTCGAGATCG CCCCCGGCGT CAAGGTCCGC GTGATCCGCT CGACCGTGAC CGGGCTCGTG
AACCGCACCC AACCCGCCGC CGCCAACAGC TGA
 
Protein sequence
MLVTPAYAQA AGGASGAAGL ASFLPLILIF VIMYFLMIRP QQKRMKEHRA MVEALKKGDE 
VITQGGLIGK VTSVREGELE VEIAPGVKVR VIRSTVTGLV NRTQPAAANS