Gene Pden_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1373 
Symbol 
ID4579804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1340206 
End bp1341507 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID639768688 
ProductATP-dependent Lon protease 
Protein accessionYP_915170 
Protein GI119384114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACGAGG ATATGCCCTC GATGGCCCCG GCCACCGAGG TGATCTGGCG CGCGATGCGC 
CGCTCGGTGC GCGACGGCGC GCCGGGCCTC CGAATTCCGC CACTGCTGCT CGACAGTCCG
CCCGGCATCG GCAAGAGCTA TTGGTCCCGA CGGCTCGGCG CGTTGCTGGC CACGTCCACC
ACCGTGATCG AGGCCACCGG CGAGAATGCC TCGTTCGGCA TTGTCGGTTC GCAACGCGGC
TGGGGCGGAT CCCATCCCGG CCGCCTGATT GAAACCGTCC TGCAAAGCCG CATCGCCAAT
CCGGTGATGG TGGTCGACGA GGTCGAAAAG GCCGGTCGGG CCACATCCAC GAACGGGCAT
GCCTTCGGGC TGGCAGAGGC GCTTCCGCCG CTGCTGGAAC CGCTGACCGC GCAACGCTGG
AGCTGCCCCT ATTACCAGGT GAAATTCGAC ATGAGCTGGG TGATCTGGGT GCTGACCTCG
AACGATTTTC GGCTGCTGCC GGAGCCCTTG CTCAGCCGTT GCCCGCCGAT CCGGCTGTGT
CATCTCACAC TTGCGGAACT GCTGGCCTTC GTGCGCCGCG AGGGCGCGAA ACGCGCCTTG
TCCGAGGCGA GTGGAGGCGA TCTGCGAGAT CCTCTCCCAT CCCTCCCTGC AACAGCATCA
CCCCAGCCTG CGGATCGCCT CCCGCATGCT GCAACGTGCC GCCGATCTCG AACAGGGGCC
GACGCTCCAC TGAGCCGGCC CATCCGCTTT TCATACCTCC CTGAATCCAA CACGCCTGCG
GCATCGCCGC AGCCGCCCCC TTCATGCCAT CGAAACGGAG AAACCATCAT GAAACTCTCC
CCCCAGGACC GCGCCTGGTT CGACAAGGTG CTGAGCGCCA TCGCCGCCGC CGAGGCAGGC
CCGTCGGGCG CGGACCTCGC GCAAGCGCCG GTCCTGTCCG ACTGGAAAGA GGCGATTTCG
CCGGACGGGC ATATCATGCT TTGGGGCAAG GTGACCGACC ACCCGCTTCT CGGCAATGCA
AGCATCCACA CCTCGCAGCT GATCGCGATT GATCCCGAGG CCGGTTGGGC GCGGACGGCA
TCCCGCTGGT ATCGGCTCGG CCGATCCATC GACGCCCTCG AGGCGGAATT GGCTGATTCC
ATGAACGGAA AGGCGAAGCT TGCGGGTTCC TTCCAGTTCG CCCTGCCGGG ATTCGCCAAC
ATCAACGACC CGGAGCTGCT TCAGAAGCTT CTGGCCACAT ATATCGCGCG GGTGCGCGGG
ATCGACGCCG CGGACCGTTC CGCCTCCGGG AAGGAGGAGT GA
 
Protein sequence
MHEDMPSMAP ATEVIWRAMR RSVRDGAPGL RIPPLLLDSP PGIGKSYWSR RLGALLATST 
TVIEATGENA SFGIVGSQRG WGGSHPGRLI ETVLQSRIAN PVMVVDEVEK AGRATSTNGH
AFGLAEALPP LLEPLTAQRW SCPYYQVKFD MSWVIWVLTS NDFRLLPEPL LSRCPPIRLC
HLTLAELLAF VRREGAKRAL SEASGGDLRD PLPSLPATAS PQPADRLPHA ATCRRSRTGA
DAPLSRPIRF SYLPESNTPA ASPQPPPSCH RNGETIMKLS PQDRAWFDKV LSAIAAAEAG
PSGADLAQAP VLSDWKEAIS PDGHIMLWGK VTDHPLLGNA SIHTSQLIAI DPEAGWARTA
SRWYRLGRSI DALEAELADS MNGKAKLAGS FQFALPGFAN INDPELLQKL LATYIARVRG
IDAADRSASG KEE