| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1368 |
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| Symbol | |
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| ID | 4579799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1335337 |
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| End bp | 1337220 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639768683 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_915165 |
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| Protein GI | 119384109 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.249969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACA CCCGTTTTCT GTTGCTTGCC ACATCTGCCT TCCTCCCGAC CATCGCCATG
GCCCAGGACG GTGCCACGGA CCAGCCGTTG TTGCTGGATG AGATCGTGAT CTCGGGTGGG
CTGACGCCGC TGGCCGCTGA TGGCTACGGT CGCGCCCATA GCGTGCTCAC CGCCAAAGAG
ATAGAAGCGC GCGGCATCAC CACCGTTCAG GATGCCCTGC GCGCCATGCC GGGTGTCGCG
GCCAGCAGCA CCGGCGCCAG TTTCACGCAG GTTCGCATCC GCGGCGCCGA GGCCAATCAC
ACGCTGATCC TGATCGATGG GATCGAGGCC ACGGGCGGGG CCGACGAATA TATCCTGACC
GGGCTGGAAA CCGCCAATAT CGAACGGATC GAGGTGCTGC GCGGGCCTCA ATCGGTGTTT
TACGGCTCGA ACGCCTCGGC GGGGGTGATC AATATCATCA CCCGCAAGGG CGGGCCGGGA
CTGCATTACG GCGGCTCTTT CGAATTGGGC AATGGCGCGG CGGCCTCGGC CCATGTCAGT
CAGCGGACCG AACGCGGCGG GATCGCGCTG AATCTGTCGG CGCGGGATGA TCACGGTTAC
GACCAGTCCG GCGATGGCGG CGAAAAGGAC GGCATCAACC GCAAGACCAT CGGGTTGTCC
GGTGACTGGC GGGCAAGCGA CGACCTGGCC GTGGGCGGCA CCCTGCGCTG GTCGGACGAG
CACTATGATT ACGACGCCAC CGCATGGGAC GCGACCGATG CCGACAGCTA TGTCGTTGAC
GATCCGGACC TGTTCAGCGA GCGGCGCGAG TTTTCGGGGG CCGTCTGGGC CGAATATTCC
ATGCTGGACG GGCAGCTGAC CCATCGGCTG GAATACCAGA AGACCATCTA CAAACAATCC
TATGACGGCG GTCCGTTCAG CCGGGGCGAG ACGGAAAAGC TGAAATACCG GCTCAGCTAT
GGGCTTGACG GGCAGCCGGT CGATTCGGCG AACCACGTCC TCAACCTGCT GGCCGAACGG
CAGAAGGACC AGAATTCGAC CGCGCCCGAT TATCGGCGCG ACATGAAATC TCTGACGGTG
GAATATCGCG GGTTTTTGGA CAATGGGCTC GATATTCAGG CTGGCATCCG CCATGACGAC
AACAAGGTCT TCGACGATTT CACCAGCTGG AATCTGGGTC TGTCATACCG CATTCCCGGC
CAGCCGGTGC GGCTGCATGC CTCGGCGGGC AGTGCGCTGG TCAACCCGTC CTATTACGAG
CTTTATGCCG ATGACGCCTA TACCGTTGGC AATTCTGGCC TGAAGCCCGA GATCAATCGC
GGCTTCGATC TGGGCGTCGA GGTCGAGGTT CTGAACGGTC GCGGGTTGAT CGATGTCACC
TATTTCAACG AGAAGATGGA GGACGAGATC ACCTATGTCT ATGGCGCGGC ACCGGATGGG
CGGGCCAGCT ATGTCAACCA GCCCGGCAAA AGCCCGCGCG AGGGCGTCGA GGTCACCGGC
CGCCTGCAGG CTACCGAGGA TCTGTCGCTG GCGCTGAACT ATACCTATCT GGACGCGAGC
AACCCGGATG GTTCAGTTGA AATCCGACGC CCGCGGCACG AGTTGGGCCT ATCGGCCACG
CTGGCCTTCC TGCAGGGGCG GGGTTCGGTG ACGGCGGATC TGCGCCATGT CTCGGGCAAT
TACGACAGCC AGTTCTGGGG CGCATATTCG ACCGAGCATC TGCCCACCTA TACCACTGTC
AATTTGGCTG CAGGTTATGA CCTGACCAAC AATGTGCGGC TGAATGCGCG GGTCGTGAAC
CTGTTCGACA AGGATTATTC CGATGTCTGG GGCTATGCCT CGCAGGGACG CACGGCCTAT
GTCGGATTGC AGGCCAGATG GTGA
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| Protein sequence | MFHTRFLLLA TSAFLPTIAM AQDGATDQPL LLDEIVISGG LTPLAADGYG RAHSVLTAKE
IEARGITTVQ DALRAMPGVA ASSTGASFTQ VRIRGAEANH TLILIDGIEA TGGADEYILT
GLETANIERI EVLRGPQSVF YGSNASAGVI NIITRKGGPG LHYGGSFELG NGAAASAHVS
QRTERGGIAL NLSARDDHGY DQSGDGGEKD GINRKTIGLS GDWRASDDLA VGGTLRWSDE
HYDYDATAWD ATDADSYVVD DPDLFSERRE FSGAVWAEYS MLDGQLTHRL EYQKTIYKQS
YDGGPFSRGE TEKLKYRLSY GLDGQPVDSA NHVLNLLAER QKDQNSTAPD YRRDMKSLTV
EYRGFLDNGL DIQAGIRHDD NKVFDDFTSW NLGLSYRIPG QPVRLHASAG SALVNPSYYE
LYADDAYTVG NSGLKPEINR GFDLGVEVEV LNGRGLIDVT YFNEKMEDEI TYVYGAAPDG
RASYVNQPGK SPREGVEVTG RLQATEDLSL ALNYTYLDAS NPDGSVEIRR PRHELGLSAT
LAFLQGRGSV TADLRHVSGN YDSQFWGAYS TEHLPTYTTV NLAAGYDLTN NVRLNARVVN
LFDKDYSDVW GYASQGRTAY VGLQARW
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