Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1367 |
Symbol | |
ID | 4579798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1334483 |
End bp | 1335343 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768682 |
Product | periplasmic binding protein |
Protein accession | YP_915164 |
Protein GI | 119384108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATGC GCTGGCTGCT GGCCGCCTGC CTTGCGGGCG GCCTTGCCGT GTGCGCCAAA GCGGAGCCAC CGCAGCGCGT GCTGTCGATG AACCTTTGCA CCGATCAACT GGCCATGCTG TTGGCGGCGC CGGGGCAGTT GATCTCGGTC AGCTATCTGG CACAGGACCC CCGCGCCTCG GTCATGGCAG AGGAGGCCAT GACCTATGAC GTCAATCACG GTCTGGCCGA GGAAATTTTC CTTTTGCAGC CCGATCTGGT GCTGGCGGGC AGTTTCACAA CGCCTGCGAC CACGGCCCTG TTGCGCCGCC TTGGCAAGCC GGTCGAGGTT TTCGCGGCCG AAAACGACTT TGACGATATT CGTACAAATA TCAGCCGCAT GGGTCAGTTA CTGGGGCGCG AGGCCGAGGG GCGGGCAATG ACCGAACGCT TCGACGCCGA TCTGGCTGCC CTGACCGCAC CCGCAGGCCA GAGCCGGCCC CGCGCCGCCA TGTATACGGC GAACGGCTAT AGCAGCGGCC CCGACAGCCT GTCGGGCCAG ATCATCGAGG CCGCCGGTTT CGACAATATC GGGGCGGAAT TCGGGCTTGG CGCCGGCGGT ATCGTGCCGC TGGAGGTTCT GCTGCTGTCC GACCCCGATC TGGTCATCAC CGGCAGTCCC TATCCCGGAG CATCGCGCGC CGAGGAGGTT CTGGACCATC CCGCCCTGCG GATGCTGAAA TCGCGCAGCT CGTCAGAAGT CATCTCGGAC CGCGACTGGG TCTGCGGCAC GCCCCGCATC CTTGATGCCA TCAGGGATCT GGCCGCCGCG CGCCATGTGA TCAATGCTCA GACAAGGCAG AGCCATGATG TTGAAAAGTG A
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Protein sequence | MVMRWLLAAC LAGGLAVCAK AEPPQRVLSM NLCTDQLAML LAAPGQLISV SYLAQDPRAS VMAEEAMTYD VNHGLAEEIF LLQPDLVLAG SFTTPATTAL LRRLGKPVEV FAAENDFDDI RTNISRMGQL LGREAEGRAM TERFDADLAA LTAPAGQSRP RAAMYTANGY SSGPDSLSGQ IIEAAGFDNI GAEFGLGAGG IVPLEVLLLS DPDLVITGSP YPGASRAEEV LDHPALRMLK SRSSSEVISD RDWVCGTPRI LDAIRDLAAA RHVINAQTRQ SHDVEK
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