Gene Pden_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1367 
Symbol 
ID4579798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1334483 
End bp1335343 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID639768682 
Productperiplasmic binding protein 
Protein accessionYP_915164 
Protein GI119384108 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGC GCTGGCTGCT GGCCGCCTGC CTTGCGGGCG GCCTTGCCGT GTGCGCCAAA 
GCGGAGCCAC CGCAGCGCGT GCTGTCGATG AACCTTTGCA CCGATCAACT GGCCATGCTG
TTGGCGGCGC CGGGGCAGTT GATCTCGGTC AGCTATCTGG CACAGGACCC CCGCGCCTCG
GTCATGGCAG AGGAGGCCAT GACCTATGAC GTCAATCACG GTCTGGCCGA GGAAATTTTC
CTTTTGCAGC CCGATCTGGT GCTGGCGGGC AGTTTCACAA CGCCTGCGAC CACGGCCCTG
TTGCGCCGCC TTGGCAAGCC GGTCGAGGTT TTCGCGGCCG AAAACGACTT TGACGATATT
CGTACAAATA TCAGCCGCAT GGGTCAGTTA CTGGGGCGCG AGGCCGAGGG GCGGGCAATG
ACCGAACGCT TCGACGCCGA TCTGGCTGCC CTGACCGCAC CCGCAGGCCA GAGCCGGCCC
CGCGCCGCCA TGTATACGGC GAACGGCTAT AGCAGCGGCC CCGACAGCCT GTCGGGCCAG
ATCATCGAGG CCGCCGGTTT CGACAATATC GGGGCGGAAT TCGGGCTTGG CGCCGGCGGT
ATCGTGCCGC TGGAGGTTCT GCTGCTGTCC GACCCCGATC TGGTCATCAC CGGCAGTCCC
TATCCCGGAG CATCGCGCGC CGAGGAGGTT CTGGACCATC CCGCCCTGCG GATGCTGAAA
TCGCGCAGCT CGTCAGAAGT CATCTCGGAC CGCGACTGGG TCTGCGGCAC GCCCCGCATC
CTTGATGCCA TCAGGGATCT GGCCGCCGCG CGCCATGTGA TCAATGCTCA GACAAGGCAG
AGCCATGATG TTGAAAAGTG A
 
Protein sequence
MVMRWLLAAC LAGGLAVCAK AEPPQRVLSM NLCTDQLAML LAAPGQLISV SYLAQDPRAS 
VMAEEAMTYD VNHGLAEEIF LLQPDLVLAG SFTTPATTAL LRRLGKPVEV FAAENDFDDI
RTNISRMGQL LGREAEGRAM TERFDADLAA LTAPAGQSRP RAAMYTANGY SSGPDSLSGQ
IIEAAGFDNI GAEFGLGAGG IVPLEVLLLS DPDLVITGSP YPGASRAEEV LDHPALRMLK
SRSSSEVISD RDWVCGTPRI LDAIRDLAAA RHVINAQTRQ SHDVEK