Gene Pden_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1361 
Symbol 
ID4579792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1326031 
End bp1327104 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content74% 
IMG OID639768676 
Producttransport system permease protein 
Protein accessionYP_915158 
Protein GI119384102 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATGC GCGCCGCGGC CCCCGGCATG GCCCGCGCCG GGGGCCGCGG CATGGGGCGC 
GGCTGGGGCT GGCTGTGGCT GGCCCCGGCC GTGCTGGTCG CGGCGCTGTT CTTCGGCACC
GCGGTGGGCG AGACGCGCAT CCCGCTTGCC ACCGTGATCG AGGTGCTGGC GGTCAAGGCG
GGGCTGTCCT CGGCCGCGCT CGACCCGATC GACGCCAGCG TGATCTGGCA TTACCGGCTG
TCGCGCGCCG TGGTCGCGGC CTGCGGCGGC GCCAGCCTGG CGCTGTCGGG GCTGATCCTT
CAGGCGCTGC TGCGCAACCC GCTGGCCGAG CCCTATCTGC TGGGGATTTC CGCCGGGGCC
TCGACCGGGG CGGTGCTGAT CGCCGTCGCG GGCGTGGGCG GCGGGCTGGT CGGCATGTCG
GCGGGGGCCT TTGCCGGGGC GTTGACCGCC TTTGCGCTGG TCGCGGGGCT TGCCCATGCG
GCGGGCGGCG GCTCGGGGTT GCGCGGGGCC GGAGTGATCA TCTTGGCGGG CATCGCCGGC
TCGCAAATGT TCAACGCGCT GACGGCGCTG ATCATCGCGC AATCGGCCAG CGCCGAGCAG
GCGCGCGGCA TCATGTTCTG GCTGCTGGGG AACCTCTCGG GCGTGCGCTG GCCCGACACC
GGGCTGGCGC TGCCGGTGGC GGCGCTGGGG CTGGCGGTGA CGCTGTGGCA TGCCCGCGCG
CTGGACGCCT TCACCTTCGG CGCCGAGGCC GCCGCCGCGC TTGGCATCGA CCTGCGGCGC
ACTCAGGCGG TGCTGATCGG CACCGCGGCG CTGGTAACCG CGGTCATGGT GTCCATCGCC
GGGGCCATCG GCTTCGTCGG CCTGGTCGTG CCCCATGCGA TGCGCTTCCT GGTCGGCACC
CGCCATGCGC GGCTGGTCCC GGCGACGGCG CTGGCCGGGG CTGTGTTCCT GGTGCTGTCC
GACGTGGTTT CGCGCATCGT CATTCCGGGG CAGGTGCTAC CCATTGGCGT GATCACCGCG
CTGGTCGGCG CGCCCGCCTT TGCCGTGGTC ATGGTCCGGG GGCGGCAGCG ATGA
 
Protein sequence
MRMRAAAPGM ARAGGRGMGR GWGWLWLAPA VLVAALFFGT AVGETRIPLA TVIEVLAVKA 
GLSSAALDPI DASVIWHYRL SRAVVAACGG ASLALSGLIL QALLRNPLAE PYLLGISAGA
STGAVLIAVA GVGGGLVGMS AGAFAGALTA FALVAGLAHA AGGGSGLRGA GVIILAGIAG
SQMFNALTAL IIAQSASAEQ ARGIMFWLLG NLSGVRWPDT GLALPVAALG LAVTLWHARA
LDAFTFGAEA AAALGIDLRR TQAVLIGTAA LVTAVMVSIA GAIGFVGLVV PHAMRFLVGT
RHARLVPATA LAGAVFLVLS DVVSRIVIPG QVLPIGVITA LVGAPAFAVV MVRGRQR