| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1346 |
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| Symbol | |
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| ID | 4580599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1312023 |
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| End bp | 1312937 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768664 |
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| Product | methylisocitrate lyase |
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| Protein accession | YP_915146 |
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| Protein GI | 119384090 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.183799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCCCT ATCTGATCGG CTCCGACCTG CCCGAGGCCC CCGCCGGCGC GCGGTTCCGC
GCAGCCCTGG CCCGCCCCGG CATCCTGCGC CTGCCCGGCG CCCATAACGG CATGGCCGCC
TTGCAGGCCC GCGCGGCCGG GTTTCAGGCG CTTTACCTGT CGGGCGCGGC CATGACCGCC
TCGATGGGCC TGCCCGACCT GGGCATCATC ACCGTGGACG AGGTCGCCTT CTTCATCCGC
CAGATCGCGC GGGCCAGTGG GTTGCCGCTG CTGGTGGACG GCGACACGGG CTATGGCGAG
GCACTGAACG TCATGCACAT GGTCCGCACG TTCGAGGATG CCGGCGCGGG TGCCGTGCAT
CTGGAGGACC AGTTGCTGCC CAAGAAATGC GGCCACCTGA ACGACAAGAA ACTGGCCTCG
GCCGGCGACA TGGCGGCCAA GGTGGCAGCG GCGGCGCGTG CACGGCGGCA CCTTGTCGTC
ATCGCCCGCA CCGATGCGGC CGCGGCCGAG GGCATCGAGG GCGCCGTCGC CCGCGCCAAG
CTCTATACCG AGGCCGGGGC GGACGCGATC TTTCCCGAGG CGCTGACCTC GGTCGAGATG
TTCCGCGAGG TCCGCGCCCG CCTGCCGGGG GTGAAGCTTC TGGCCAACAT GACCGAGTTC
GGCCGCACTC CGGCGCTGAC GGCCGAGGAG TTCCAGGAAC TGGGCTATGA CATGGTGATC
TGGCCGGTCT CGTCGCTGAG GGTCGCGAAC AAGGCGCAGG AGCGGCTTTA CGCGGCGCTG
GCACGCGACG GCGCCACCAC CGCCATGCTG CCCGAGATGC AGACCCGCGC CCAGCTTTAC
GAGTTGATCG GGCTCAATGC CTTCGAGGCG CTGGACCGAT CCATCGCCCG CAGCGTGCTG
CCCCCGCAGG GCTGA
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| Protein sequence | MMPYLIGSDL PEAPAGARFR AALARPGILR LPGAHNGMAA LQARAAGFQA LYLSGAAMTA
SMGLPDLGII TVDEVAFFIR QIARASGLPL LVDGDTGYGE ALNVMHMVRT FEDAGAGAVH
LEDQLLPKKC GHLNDKKLAS AGDMAAKVAA AARARRHLVV IARTDAAAAE GIEGAVARAK
LYTEAGADAI FPEALTSVEM FREVRARLPG VKLLANMTEF GRTPALTAEE FQELGYDMVI
WPVSSLRVAN KAQERLYAAL ARDGATTAML PEMQTRAQLY ELIGLNAFEA LDRSIARSVL
PPQG
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