Gene Pden_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1301 
Symbol 
ID4579482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1264128 
End bp1264817 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID639768619 
Producthypothetical protein 
Protein accessionYP_915102 
Protein GI119384046 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGAC AGCTGACCCT GGACCTGACG ATGCCGCCGG CCTCGTCGCG CGACGATTTC 
CTGATCACCG CGGCCAATCG CGACGCGCTG GCGATGCTGG ATGCGCCGGG GTGCTGGCCG
CAGGGGCGGC TCTTGCTGAT CGGCGGTCCC GGTTCGGGCA AGTCGCATCT GGTCGGCTTC
TGGGCGGCGG AACATGGTGC GCAGATCTGC CACGGCTGGA CGCTGGCGCC CGAAGGCGTG
GACGAGCTGG TCCAGCCCGG CGCCGCGCTG GTCGTCGAGG ACGCGCATGA GATCGGCGGC
AACCCGACCG CCGAGCAGGG CCTGTTCCAC CTGTGGAACC TTGCCGGTGC GCGGGGGGCG
CTTTTGCTCA TCACCGCGCG GTCGGCGCCG CGCGACTGGG GCGTGGCGCT GCCCGACCTG
CGCTCGCGGC TGGAGACGGC GGCGCAGGCG ATCCTCGGCC CGCCCGACGA TGCGATGCTG
ACCGCCGTGC TGGTCAAGCT GTTCGCCGAC CGCCAGATCC AGGTCGCGCC CGAGGTGGTG
GACTGGCTGG TGCTGCGCAT GGAGCGCGAC CTGGACATGG CCCGCCGGCT GGTCGCGGCC
ATCGACCGCG AATCGCTGGC CGACCGCCGC GCCATCACCC GTCGCCTCGC CGCCGAGCTT
CTGGACAAGC TGGCCCCCGT CGACGCATGA
 
Protein sequence
MARQLTLDLT MPPASSRDDF LITAANRDAL AMLDAPGCWP QGRLLLIGGP GSGKSHLVGF 
WAAEHGAQIC HGWTLAPEGV DELVQPGAAL VVEDAHEIGG NPTAEQGLFH LWNLAGARGA
LLLITARSAP RDWGVALPDL RSRLETAAQA ILGPPDDAML TAVLVKLFAD RQIQVAPEVV
DWLVLRMERD LDMARRLVAA IDRESLADRR AITRRLAAEL LDKLAPVDA