| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1287 |
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| Symbol | |
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| ID | 4580906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1246789 |
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| End bp | 1248519 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768605 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_915088 |
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| Protein GI | 119384032 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.592615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG GCACCATGCC CGATCACCTG ATGATCGCGC CGATCCTGAT CCCGCTGGTG
GCGGGGGCGA TCATGCTGTT CTACAACGAC CGCAACCGGC AGACCAAGCT GATCATGGGG
CTGGTGGCGG TCGGGCTGAC CTTCCTGGCC TCGGTCGAGC TGATGTCAGG CGTGAAATCC
GTGACCGAAC AGGGCGGCAC CGTCGTCGGG CTTTACCGCC TGGGCGACTG GCCGGTGCCG
ATCGGCATCG TGCTGGTGCT GGACCGGCTT TCGGCGATGA TGGTGATGCT GACCGCGCTG
CTGGCCGCGC CCTCGCTGAT CTATGCCGCG GCCGGCTGGC ACGGCAAGGG CCAGCATTAC
CACAGCATGT TCCAGTTCCT GCTGGCCGGG GTCAACGGCT CGTTCCTGAC CGGCGACCTG
TTCAACCTCT TCGTCTTTTT CGAGGTGATG CTGGCGGCCT CCTACGGGCT GATGCTGCAC
GGCTCGGGTC CCGAACGGAT CAAGGCCGGG CTGCATTACC TTGCCGTGAA CCTTGCGGCC
TCGCTGTTCT TCCTGATCGG GGTGGCGCTG GTCTATGGCA CCACCGGCAC GCTGAACATG
GCCGATATCG GCCGGGCGCT CTATTGGCTC GACGATGCCG AGCGGCTGCT GTTCCATGCC
GCCGCGACCT TCCTCGGCCT CGCCTTCCTG ATCAAGGCCG CGGCCTGGCC GCTGTGCTTC
TGGCTGCCGC CGACCTATGG CGCCGCCTCG CCGCCGGCCG CCGCGATCAT GGCGATCATG
ACCAAGGTCG GGATCTATGT CATCCTGCGG CTGTCGCTGC TGGTGCTGGG GCCGGATGCC
GGGCCCTCGG CGGGTTTCGG CGCCCCGGTG CTGATGATCG GCGGCGTGCT GACCATGGGC
TTCGGCATGA TCGGCATCCT CGGCACGCCG GAACTGGTGC GCAAGGGCGG CTATCTGGCG
ATCATCTCGT CGGGCACGGT GCTGGCCTCG ATCGGCTTCG CGCAGGCCGG GGGCGGCAGT
TCGATGCTGG GCGGCGCGCT TTACTACATG GTGGGCTCGA CCGCCGCCAT CTCGGCCTTC
TTCCTGATCG CCGATCCCGT GAGCCGCAAC GACGAGGGCG ACGACGACGC CCCGGTCGAG
ACTGACGGCT TCGACCCGCT TTCGGAACGC TGGGCGCCGA TGGGCCTCGG CACGGTCGAG
GACACCACCG CCCCGGCCAG CCATCGCACG GTCAGCTGGC TGACCATGGC GATCTGCTTC
AGCCTGGTCG CGGCGATGAT CGCCGGCTTG CCGCCGATGC CGGGCTTCAT CGGCAAGTTC
GCCATCCTGC GCGGCGCGGT CCAGGACAAC CTGCCCACCT CGGGCCATCT GCCGGTGATC
CTGTGGGCCT ATGCCGCCAT GTTGATCCTG TCGGGCCTGG GGGCGCTGAT CGCGCTGATG
CGCTTCGGCA TCCGCCGCTT CTGGGCCGAG GAAGGCCCGG CCCCGCGCAT CCTGGCGCTG
GAGGTGGTGC CGGTGGTCCT GCTGCTGGGC ATGATCGGCT TGCAGACCGT GCGCTCGGAT
GCGCTGCTCG GCTATACCAA TGCCACCGCG AGCGCGCTGC TTGAGCCCGG CGTCTATCGC
AGGGCGGTGC TGGCCGGCGC CCAGGACGTG CGCGCCGCAC CCGTGCAAAG CCTCGCCCCC
GATCCCCAGC CCCAGACCCA AACCCAGACC ACGCAGGAGG AGGCGGAATG A
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| Protein sequence | MNDGTMPDHL MIAPILIPLV AGAIMLFYND RNRQTKLIMG LVAVGLTFLA SVELMSGVKS
VTEQGGTVVG LYRLGDWPVP IGIVLVLDRL SAMMVMLTAL LAAPSLIYAA AGWHGKGQHY
HSMFQFLLAG VNGSFLTGDL FNLFVFFEVM LAASYGLMLH GSGPERIKAG LHYLAVNLAA
SLFFLIGVAL VYGTTGTLNM ADIGRALYWL DDAERLLFHA AATFLGLAFL IKAAAWPLCF
WLPPTYGAAS PPAAAIMAIM TKVGIYVILR LSLLVLGPDA GPSAGFGAPV LMIGGVLTMG
FGMIGILGTP ELVRKGGYLA IISSGTVLAS IGFAQAGGGS SMLGGALYYM VGSTAAISAF
FLIADPVSRN DEGDDDAPVE TDGFDPLSER WAPMGLGTVE DTTAPASHRT VSWLTMAICF
SLVAAMIAGL PPMPGFIGKF AILRGAVQDN LPTSGHLPVI LWAYAAMLIL SGLGALIALM
RFGIRRFWAE EGPAPRILAL EVVPVVLLLG MIGLQTVRSD ALLGYTNATA SALLEPGVYR
RAVLAGAQDV RAAPVQSLAP DPQPQTQTQT TQEEAE
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