| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1275 |
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| Symbol | |
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| ID | 4580314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1234011 |
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| End bp | 1236029 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768593 |
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| Product | transketolase |
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| Protein accession | YP_915076 |
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| Protein GI | 119384020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.11718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG CCGACCGCCG CAAGGCCGAT CCCGCTCACT GGCGCCTCGC CACCGCGATC
CGCGCCCTTT CCATGGACGC CGTCGAGGCC GCGAACTCGG GCCATCCCGG CATGCCGATG
GGCATGGCCG ACGTCGCCAC GGTCCTGTTC CGCAACCATC TGAAATTCGA CGCCGCCGCA
CCGAACTGGT TCGACCGCGA CCGCTTCGTG CTGTCGGCCG GCCACGGCTC GATGCTGATC
TATTCGCTGC TCTACCTGAC CGGCTACGAG CAGATGTCGA TCGACCAGAT CCGCAATTTC
CGGCAATGGG GCTCGATCAC CGCCGGCCAC CCGGAATTCG GCCATGCCGA GGGCGTCGAG
ACGACGACCG GCCCGCTGGG CCAGGGCATC GCCACCGCCG TCGGCTTCGC CATCGCCGAA
GAGGCGATGC GCGCCCAGTT CGGCGAGGGG CTGTGCAGCC ACAAGACCTG GGTCATCGCC
GGCGACGGCT GCCTGATGGA GGGCATCAGC CAGGAGGCCG TCGGCCTGGC CGGCCACCAG
AAGCTCGGAA ACCTGATCGT GCTCTGGGAC AACAACGACA TCACCATCGA CGGCCGGGTG
TCGCTGTCGG ATTCGACCGA CCAGCTGAAA CGCTTCGAGG CCTCGGGCTG GCGCACGCTG
TCCTGCGACG GCCACGACCC GGCCGATATC GAGCGCGCGC TGGCCGATGC CGCCAGCGGC
AAGGACGACC GCCCGGTGCT GGTCGCCTGC AAGACCATCA TCGGCTACGG CGCGCCGAAC
AAGCAGGACA GCTCGGGCGT GCACGGCTCG GCGCTGGGGG CGGCGGAAAT CGTCGCCGCG
CGCGAGGTGC TGGGCTGGGA TTCGCCCGCC TTCGTCATCC CCGAGGACAT CCTGGCCGAA
TGGCGCGCCA TCGGCGCCAA GGGCCGCGAG GCACGCGAAG CCTGGGCCGC CCGCGTCGAT
GCGGCAGAGA ACCGCGACGA ATTCGCCCGC CGCATCTCGG GCGGCGTCAG CGAACGGCTT
GCCCCGACCA TCGCGGCGCT GAAACAGCAG GCGCTGGACA GCAAGCCCAA GGTCGCCACC
CGCAAGGCCA GCGAGATGGT GCTGGAGGTG GTGAACCCCG AACTGCCCGA AACCATCGGC
GGCTCGGCCG ACCTGACCGG CTCGAACAAC ACCAGGACCA AGGATCTGGG CACCTTCTCG
CCGGAAAACC GCAAGGGCCG CTATATCAAC TACGGCATCC GCGAACACGG CATGGCGGCA
GCGATGAACG GCCTCTGGCT GCATGGCGGG CTGCGCCCCT ATGGCGGCAC CTTCATGTGC
TTCACCGATT ACGCGCGCGG CGCCATGCGG CTCTCGGCGC TGATGGGCCT GCCGGTGACC
TATGTCATGA CCCATGACAG TATCGGCCTG GGCGAGGACG GCCCGACCCA CCAGCCGGTC
GAGCATCTGG CGATCTGCCG CGCCACGCCC AACACGCTGA CCCTGCGCCC CTGCGACCTG
ATCGAGACCG CCGAGGCCTG GGAAATCGCG CTGTCGAGCG AATCCACCCC GGCCGTGCTG
GCGCTGTCGC GCCAGAACCT GCCGATGCTG CGCGAACAGG CGGGCGAGAA CCTGACCGCC
CGCGGCGCCT ATGTCCTGCG CGAGGCCAGC GCCGCGCCCA AGGTGATCCT GATGGCCTCG
GGCTCCGAGG TCGAGATCGC CGTCGCCGCA CGCGATGCGC TGGAGGCCGA GGGCGTGCCC
ACCCGCGTCG TCTCGGTCCC GTCGATGGAG CTGTTCCGCG ACCAGGATGC CGAATACCGC
CGGCAAGTCC TGCCCGCCGG CACGGTGCGC GTCGCCATCG AGGCCGCCGT GCGCCAGCCC
TGGGACTGGC TGCTCCTGGG CGAGCGCGGG CGCGAGGAGA CCTCGGGCTT CATCGGCATG
ATCGGCTTCG GCGCCTCTGC CCCGGCGCCG GTGCTCTACA AGGAGTTCGG CATCACCGCC
GAGGCGGCCG CCGCCGAAGC CCGCCGCCTG CTGGGCTGA
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| Protein sequence | MDIADRRKAD PAHWRLATAI RALSMDAVEA ANSGHPGMPM GMADVATVLF RNHLKFDAAA
PNWFDRDRFV LSAGHGSMLI YSLLYLTGYE QMSIDQIRNF RQWGSITAGH PEFGHAEGVE
TTTGPLGQGI ATAVGFAIAE EAMRAQFGEG LCSHKTWVIA GDGCLMEGIS QEAVGLAGHQ
KLGNLIVLWD NNDITIDGRV SLSDSTDQLK RFEASGWRTL SCDGHDPADI ERALADAASG
KDDRPVLVAC KTIIGYGAPN KQDSSGVHGS ALGAAEIVAA REVLGWDSPA FVIPEDILAE
WRAIGAKGRE AREAWAARVD AAENRDEFAR RISGGVSERL APTIAALKQQ ALDSKPKVAT
RKASEMVLEV VNPELPETIG GSADLTGSNN TRTKDLGTFS PENRKGRYIN YGIREHGMAA
AMNGLWLHGG LRPYGGTFMC FTDYARGAMR LSALMGLPVT YVMTHDSIGL GEDGPTHQPV
EHLAICRATP NTLTLRPCDL IETAEAWEIA LSSESTPAVL ALSRQNLPML REQAGENLTA
RGAYVLREAS AAPKVILMAS GSEVEIAVAA RDALEAEGVP TRVVSVPSME LFRDQDAEYR
RQVLPAGTVR VAIEAAVRQP WDWLLLGERG REETSGFIGM IGFGASAPAP VLYKEFGITA
EAAAAEARRL LG
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