Gene Pden_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1228 
Symbol 
ID4581082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1192946 
End bp1193203 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content59% 
IMG OID639768545 
ProductXRE family transcriptional regulator 
Protein accessionYP_915029 
Protein GI119383973 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCGCGG GGATGGATAC CGACCCCGAC ACCTTTCTCC TGGCCTATGC GCGGGTGCTG 
CGCAGGCATC GCAAGAACAT GGAGCTCTCG CAGGAGGAGC TTGCGTTCCG GGCGGGATTG
AGCATGCGCT ATATCTCGTT GCTTGAGAGC GGGAAGCACC AGCCCAGTCT TGGCACGATG
AAGGCACTGG CGGATGCTCT GGACACGAGC CTTACCGCGA TGATCGGTGA AGCCGAAAAC
AACAACGATC AAGCATAG
 
Protein sequence
MCAGMDTDPD TFLLAYARVL RRHRKNMELS QEELAFRAGL SMRYISLLES GKHQPSLGTM 
KALADALDTS LTAMIGEAEN NNDQA