| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1223 |
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| Symbol | |
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| ID | 4581077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1189396 |
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| End bp | 1190604 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639768540 |
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| Product | phage integrase family protein |
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| Protein accession | YP_915024 |
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| Protein GI | 119383968 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.159042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGATCA AATACGCATA TCTCAAGCAA CAGACTTGGC TGTATCGCAG GAACTATCCC
AAGGAACTCC AGCCTGTTCT GGGGCAGGCC ATGAAGCAGT CGCTGAAGAC CGGGGATGCC
CGCATCGCCA AGGCACGGGC CGCGGAGGTC AATGCCAAGT ATGAGGAGGT GTTGGCGAAG
GCGAGGGCGG GGCAGGTGGT GGAGAAGCCG GTGCCCGTGA TGGTGGCGCC GCCAGTGTTC
TCGCCCGTGG TGCTAGTAGG GCGCAGGACA GTCAAGGAAC TTGCCCGGAC TTATCTCAAT
CAACGGTCGC GGCAACTTCG GCATGGCGGG TTCAAGTCAG TCAGATTCTC CGTCGGGCTG
TTCGTGTCGG CCTATGGGAC GAGGCTGATC GGGGCCGTCA CACGCGACGA TGCCGTGGCC
TTCGTGCGGA AGGTGGCGCT GCTCGGCTGT CATGCCGGGA AGTCGTGGCG AACCCGTGGC
TATGGGCTGG ACCAACTCAT TCAGGCCAGT CGTGGCGATC GTATTTCTGC CCGGACGCAG
CGGCGGACGG TTAGTCAGGT CGCGCATTTT CTCGACTGGG CGGTGTACGA AGGCGAGTTG
GGGGCGAATC CCTTCAAGAC CGTGCGGGTG GAGGCCAAGG GCAAAAACCG CAGCTACGCG
GCACTGACGG ACGCCGAGGT CGGGAAGCTG GTGGACTTAG ACGATTCCCG GATCGGTGAC
GTCCTGCTGT TCTGCCTGCT GACCGGGATG CGAGCCGGTG AAGCCGTTGG GCTGGTCAGG
GAGGATCTGG TCTGGAAGGG CAATCTGGGC TGGTTCGTCT GGGTCAGGCC CAACGCGGTC
AGGACGCTGA AAACTGATGC TGCCGAACGC TTTATCCCGC TGCATTCAGC CCTGACTCCG
GTTCTGGAAA GGCTGCCGAG GCAGGGGCGG CTGTTTCCTG ATCTGACGGT TTCGGTCGTG
ACCAAGCGGT TCGCCACCAT GCGGAAAGCT CTGGCGCTGG ATCGGCCCGG TGTCGTGTTC
CATTCCACCC GGAAATGGTT CGTGACGCAG TGCGAGCGGG CAGGGGTGCC GGAGCATTTC
ACGGCATCCA TCGTCGGGCA CCAGTCGGCA CGGTCGGAGA ACAGGATGAC CTATGGCATC
TACTCCGCCG GGATCAGCAA TGAGCAGAAG CGCGAGATCG TCGAGAAGGT GGGGTTGCCA
TGCCTCTGA
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| Protein sequence | MRIKYAYLKQ QTWLYRRNYP KELQPVLGQA MKQSLKTGDA RIAKARAAEV NAKYEEVLAK
ARAGQVVEKP VPVMVAPPVF SPVVLVGRRT VKELARTYLN QRSRQLRHGG FKSVRFSVGL
FVSAYGTRLI GAVTRDDAVA FVRKVALLGC HAGKSWRTRG YGLDQLIQAS RGDRISARTQ
RRTVSQVAHF LDWAVYEGEL GANPFKTVRV EAKGKNRSYA ALTDAEVGKL VDLDDSRIGD
VLLFCLLTGM RAGEAVGLVR EDLVWKGNLG WFVWVRPNAV RTLKTDAAER FIPLHSALTP
VLERLPRQGR LFPDLTVSVV TKRFATMRKA LALDRPGVVF HSTRKWFVTQ CERAGVPEHF
TASIVGHQSA RSENRMTYGI YSAGISNEQK REIVEKVGLP CL
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