| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1173 |
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| Symbol | |
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| ID | 4579938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1144701 |
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| End bp | 1145660 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768489 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_914974 |
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| Protein GI | 119383918 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC GACAGTTGCG CTATTTCACC GCCGTCGCGC GGGAACGGAA CTTCACCCGC
GCGGCGCAGA GCCTGAACAT CGCCCAGCCG CCCCTCAGCC GCCAGATACA GCTTCTCGAA
GAGGAACTGG GCGTCGTCCT GATCCTGCGC AAGAGCCGGC CCATCAAGCT GACGGATGCG
GGACGGCTGT TCTATGAACA GGCGCTTCAG GTGCTGGGGC GCGTCGATCA GATGAAGGAT
GCGACGCGCC GGGTCGGACT GAACCGGAAC CGGGTGCTGT CCATCGGCTT CGTGGCATCG
ACGCTTTACG GCGGGCTGCC GTCGCTGGTC AGGAAGCTGC GCCAAAATGT GCCCGAACTG
GACATCCAGC TGCTTGAGAT GCTGTCGATC CAGCAGATCC CCGCGCTGAA GGAAGGGCGG
ATCGACATCG GCTTCGGCCG CCTCAGGCAC AGCGACCCGA ATGTCGTCGG CACCGTCCTG
CGCGAGGAAC GGCTTGTGGC CGCCCTGCCC CAGGACACGT CCCTGGCGCG GGATCCCGCA
CCGCTGCCCC TGGCTGCGCT GGCCGGGCAG AAGCTGATCG TCTATCCCAA GGAACCGCGG
CCCAGCTATG CCGACCAGAT CATCAACCTG CTGCAAGAAG AGGGCATACG CACCGCCGAC
GTGCTGGAGG TGCGCGAAAT CCAGACGGCG CTGGGGCTGG TCGCGGCGGA TTCGGGCATC
TGCATCATCC CCTCGTCGGC CCGGCAGATG CGGTCGGACG TGAGGTATCG GATAATCGAC
AGCCCGCGGG CGACCTCTCC GGTCATCCTC AATCACCGCG CGGGCGACAC GTCGCGCTAT
CTCGATCTGG TCAAGCAACT GATCCGGGAC ATGTATGCCG AAAACCCGGT CTGGCTGGAG
GCCAACAACC TTCGCGCCCC GATTGCCGGG GAGGAAGGCC CGGGACCATC AGGAAGATAG
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| Protein sequence | MDLRQLRYFT AVARERNFTR AAQSLNIAQP PLSRQIQLLE EELGVVLILR KSRPIKLTDA
GRLFYEQALQ VLGRVDQMKD ATRRVGLNRN RVLSIGFVAS TLYGGLPSLV RKLRQNVPEL
DIQLLEMLSI QQIPALKEGR IDIGFGRLRH SDPNVVGTVL REERLVAALP QDTSLARDPA
PLPLAALAGQ KLIVYPKEPR PSYADQIINL LQEEGIRTAD VLEVREIQTA LGLVAADSGI
CIIPSSARQM RSDVRYRIID SPRATSPVIL NHRAGDTSRY LDLVKQLIRD MYAENPVWLE
ANNLRAPIAG EEGPGPSGR
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