Gene Pden_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1163 
Symbol 
ID4579929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1135367 
End bp1135786 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content71% 
IMG OID639768481 
ProductNUDIX hydrolase 
Protein accessionYP_914966 
Protein GI119383910 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.997199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TGATCGCAGC GGGACTGGTC ATGCGCCCGG ACGGCCGGAC GCTGCTGGTG 
CGCAAGGCCG GAACGCATGC CTTCCAGCAG CCCGGCGGCA AGATCGACGC CGGGGAAACC
GCCGCAGCCG CCCTGTGCCG CGAGCTTTCC GAGGAAACCG GCTTGCGGGT GGATGCGGGA
CAGATGCGCG CCCTGGGCCG GTTTCGTGCC CGCGCCGCGA ACGAGCCCGG CCGGCAGGTG
GTCGCCGACC TGTTCCTGCT GCATCTGCCG GAGGGTGCGG AGATCGTCCC CGGCGCCGAG
ATCGCCGAGG CGCGCTGGAT CGATCCGGCA TGCGACGACA TCCCCCTCGC GCCGTTGAGT
GCAGAGGAGA TCCTGCCGCG CTGGGTCTCG GGCGCCTTCG CGCCGCAGCA GGCCGGTTAG
 
Protein sequence
MDIMIAAGLV MRPDGRTLLV RKAGTHAFQQ PGGKIDAGET AAAALCRELS EETGLRVDAG 
QMRALGRFRA RAANEPGRQV VADLFLLHLP EGAEIVPGAE IAEARWIDPA CDDIPLAPLS
AEEILPRWVS GAFAPQQAG