Gene Pden_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1154 
Symbol 
ID4580468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1129819 
End bp1130460 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID639768473 
Producthypothetical protein 
Protein accessionYP_914958 
Protein GI119383902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.940122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT ATGTCATCTA TACCCGCATC GGCCCCGACG ATTTGGGCCG CGCCGACGCA 
AGCCTTGCGG CACAAGAGCG CGACATCCGA TTTTTCCTGT TCGAGCGGGA TGCGGAGGGC
GACGTCGCGG CGCGGCGATG CGATCAGGCA GCCGGGGCGG GGAAGGTCGG CGGGGAACTG
ATCGAAGCTC TCGCACTATG CCGGGACATG GGCGCCACGC TTCTGGTGGC GCGCATCGAC
CGCCTGCCTT TCGATGAGGC GGGCTTTGCG GCCTTTCTTG CGGAATCCGA ACTGGACCTG
AAAGTCGCGG CGCTGCCGGA CGCGCAAAAG CCGGACCTTC TTGCCCATGC CCGCCTTCTG
AGGGAAGAGC GGCGTTTCGA TGCCCGGCGT GCCGCACGAT ACCTGTCGCG AAGCCAGGCA
AAGGGCTGGC AATGCACCGT CGCCGATCCC GAGGCGGAAG GCGTCGAGCA GATCGCGCGG
ATCGCCTTGC CCCTCAGGGA TGGCGGCGCG ACTTTGCGCG ACATCGCCTC GGCCTTGAAC
CGGGTCGGCC TGACGACCGC GCGCGGCACG GCCTGGCGGG CGAACCATGT TTCGCGAATC
CTGCAATACA TGGACAGCCA AAGGGCCGGC GGCGGGTTCT GA
 
Protein sequence
MTRYVIYTRI GPDDLGRADA SLAAQERDIR FFLFERDAEG DVAARRCDQA AGAGKVGGEL 
IEALALCRDM GATLLVARID RLPFDEAGFA AFLAESELDL KVAALPDAQK PDLLAHARLL
REERRFDARR AARYLSRSQA KGWQCTVADP EAEGVEQIAR IALPLRDGGA TLRDIASALN
RVGLTTARGT AWRANHVSRI LQYMDSQRAG GGF