| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1146 |
|---|
| Symbol | |
|---|
| ID | 4580460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1122331 |
|---|
| End bp | 1123320 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768465 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_914950 |
|---|
| Protein GI | 119383894 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.720199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGCCG CTGACAGCCT CGGCCCCCTG CCTCGCGTAG CGATAGACCT GCATGCGCTC
GAACTTTATC TCGCCGTCTT CGGCACCGGC AGCATGACCG CCGCCGCCGA GCGGATGCAG
CTGACGCAAT CGGCGGTATC CCGGCAGATC CTGCGGCTTG AGGCGGAACT GGGCGTTCCG
CTGTTCGACC GGGCCTCGCG CCCCATGCTG CCGACGCCGG CCGGCCGTCG GCTGGCGCAA
AGCGCCGAGC GGCTGCTGTC GCAGGCGGCA TCGCTGAGAA ACGAGTTGCT GGACGCCAAC
CAGACGACCC TGACCCAGCT GCGGCTGGGG ATCATCGATT CGCTGTCCGA TCCGCTGGTG
CCGCAGTTGA TCAAGGCCAT GCGCCATACC GTCGACGCGG TCTCGATCTT CAGCGGCTTC
ATGGAGCCGC TGCGGCAAAA GCTGATCAAC GGCGAGCTGG ACGCCGTCAT ATCGGCGGAC
CCTTTCGACG ACCTCGACCG CTTCGACCGT CACGAGCTTT TCTCCGAGCA GTTCATCGCG
CTGGTGCCCA AGGACGTGCC GCCGTTCCGG GACGAGGAAT CGTTTCGCCG TTTCGCCACC
ACCTCGCCGA TGATCCGCTC GGGCGCCGCG ACGGGCATCG CGCGGCGGGT CGAACAGCAA
TTCCGCCGCA CCCGGCTGGA GGTCCCGAAT GCCTTCGCCT GCGACACCAT CGATTCCATC
ATCAGCTTCG TCGCGGCCGG GCTGGGCTGG ACCATCCTGA CGCCAAGCTG CATCCGCAAA
TGCGCGAACC ATGTGCCGTT CCTGCAAGTC CTGCCGCTGC CCGGCCCGGC CTTCGCGCGG
CGGATCTATC TGGTGACGCG CAGCGGCGAG TTGACGGCAT TGAAGCCGCT GCTGGTCCAG
ACCTGCCGCA CGATCGTCGC CACGCAATAT GTCCCCGCCC TTGGCGCCCT GGCCCCTTGG
CTGGGCGCGG CCGTGACGGT CGCGAAATAG
|
|---|
| Protein sequence | MCAADSLGPL PRVAIDLHAL ELYLAVFGTG SMTAAAERMQ LTQSAVSRQI LRLEAELGVP
LFDRASRPML PTPAGRRLAQ SAERLLSQAA SLRNELLDAN QTTLTQLRLG IIDSLSDPLV
PQLIKAMRHT VDAVSIFSGF MEPLRQKLIN GELDAVISAD PFDDLDRFDR HELFSEQFIA
LVPKDVPPFR DEESFRRFAT TSPMIRSGAA TGIARRVEQQ FRRTRLEVPN AFACDTIDSI
ISFVAAGLGW TILTPSCIRK CANHVPFLQV LPLPGPAFAR RIYLVTRSGE LTALKPLLVQ
TCRTIVATQY VPALGALAPW LGAAVTVAK
|
|---|
| |