Gene Pden_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1117 
Symbol 
ID4580451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1094617 
End bp1095267 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID639768436 
Producthypothetical protein 
Protein accessionYP_914921 
Protein GI119383865 
COG category[S] Function unknown 
COG ID[COG1920] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC CCGACTGCGC ACGGCTGGTG GTCGTGCCGA TGAAGGACCC CAGTCGCGCC 
AAGACCCGGC TGGGCGAGGT GCTGGACCCC TCGCGCCGCG CAAGGCTGGC GGTGACGCTG
TTCAAGCTGA CCCTGCAGCG GCTTGGCCGT GCGCAGGGCG CGGTGACGCA CGGCTTTGAC
ATCGCCACCG TGACCGCAAG CCCCGCAATC GCCAGGCTGG CCCGCGATGC CGGGATCGCG
GTGATAGACG AGGGGTCGGC CGATGGTCTG AACGCCGCCG TGACCCTTGC CGCGGACTGG
GCGGCGCTAC GCGGCTATGC CTCGCTGGGG GTGCTGCCCG GCGACCTGGC CGCGCCGACG
CTGGGCGATC TGCTGCGGCT TCTGGATCGT CCCGCCGCGC CGGATCTGGC GGTCGTCTGC
GCCTCCGCCG ATGGCGGGAC CAATGCGCTG ATCCTGCCGC TGCCCGCACG AATGCGCTTT
CGCTATGGGC AGGGCTCGTT CCGGGCGCAT CTGGCCGAGG CCGGCGCGGC GGGGCTGCAT
ACCCTTGCCC CGGCGCTGGG CAGCCTGCGC CATGACGTCG ACCGGCGCGA GGATCTGCTG
GGCTTTTCGC TGCTGCATCA CGCGCCCATG ACCGTCGAGG CGCGGCCATG A
 
Protein sequence
MIRPDCARLV VVPMKDPSRA KTRLGEVLDP SRRARLAVTL FKLTLQRLGR AQGAVTHGFD 
IATVTASPAI ARLARDAGIA VIDEGSADGL NAAVTLAADW AALRGYASLG VLPGDLAAPT
LGDLLRLLDR PAAPDLAVVC ASADGGTNAL ILPLPARMRF RYGQGSFRAH LAEAGAAGLH
TLAPALGSLR HDVDRREDLL GFSLLHHAPM TVEARP