Gene Pden_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1105 
Symbol 
ID4580439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1080449 
End bp1081447 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content57% 
IMG OID639768424 
Productpeptidase M19, renal dipeptidase 
Protein accessionYP_914909 
Protein GI119383853 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TCATGAAGGA CAAGGCCAGC ACGATCTATG AGAATGCAGT CGTCATCGAC 
GGTCTCATCA TCTCGAAATG GGGCGGGGAT CTGTTCAGAG AAATGCAGCA ATCGGGGCTG
ACGGCCGCGA ACTGCACCTG CAGCGTCTGG GAGAATTTCA GCGATACCGT CAACAATATC
GTGCAATGGA ACCGCTGGTT TCGTGAATTT GGCGACCATA TCGTCAAGGC GGAAAGCGTT
GCGGATATTC GCCGCGCGAA GGCTTCTGGA AAGACGGCGA TCGTTCTGGG CATGCAGAAC
ACCTCGGCTT TCGAAGACAG GATCGGCTAT GTCGAGATCC TCAAGACCCT TGGTGTCGGC
ATCGCGCAGA TGACGTACAA TACCCAGAAC TGGGTCGGCA GCGGCTGCTA TGAAAGCCGC
GACAGCGGCC TGTCGGATTT CGGGCGCGAG GTCGTGGCCG AGATGAACCG AGTCGGAATG
CTGTGTGATC TCAGCCATGT AGGGCCGAAG ACGTCGAGAG AGGTGATCGA CACCTCGACG
GTGCCGGTTG CCTATTCGCA TTGTCTGCCC GCGGGGCTGA AGGCGCATCC CCGCAACAAG
TCGGACGAGG AACTGCGCTA TATCGTCGAC AAGGGTGGTT TTGTCGGCGT GACGATGTTC
CCGCCCTTTC TGGCCAATGG CGTCAATTCG ACCATTGCCG ATTACATCGC TGCAATGGAT
TACGTCATCA ATATCGTGGG CGAGGATGCT GTCGGCATCG GCACCGATTT CACACAGGGC
TATGACCGCC CGTTCTTCGA CTGGATCACG CATGACAAGG GATTTGGCCG CCGCCTGACC
AGCTTTGGCG AGATCATCAA CCCGGCCGGC TTCCGCGAGA TTCGGGATTT TCCGAATATC
GCGGATGCCA TGGCCGATGC CGGCTGGACC GAGGCACGGA TCGAAAAGAT CCTGGGTTTG
AACTGGTTGA ACCTGCTGCA AACGGTCTGG GGAAAGTAA
 
Protein sequence
MENVMKDKAS TIYENAVVID GLIISKWGGD LFREMQQSGL TAANCTCSVW ENFSDTVNNI 
VQWNRWFREF GDHIVKAESV ADIRRAKASG KTAIVLGMQN TSAFEDRIGY VEILKTLGVG
IAQMTYNTQN WVGSGCYESR DSGLSDFGRE VVAEMNRVGM LCDLSHVGPK TSREVIDTST
VPVAYSHCLP AGLKAHPRNK SDEELRYIVD KGGFVGVTMF PPFLANGVNS TIADYIAAMD
YVINIVGEDA VGIGTDFTQG YDRPFFDWIT HDKGFGRRLT SFGEIINPAG FREIRDFPNI
ADAMADAGWT EARIEKILGL NWLNLLQTVW GK