Gene Pden_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1091 
Symbol 
ID4578787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1064693 
End bp1066000 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID639768410 
Producthistidinol dehydrogenase 
Protein accessionYP_914895 
Protein GI119383839 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC ATGTGAAGAC CCCGCGCCTG CAGCAGGGCG ACCAGACCGA CCCCGCCGTC 
ACCGAAGCCG TCGAGAAGCT GCTGGCGCAG GTCGCCGAGG GTGGCGACAA GGCCGTGCGC
GAGCTCAGCG TCAGGTTCGA CGGGCTCGAC CGCGACAGCT ATCGGCTGAC CGAGGCCGAG
ATCGCCGCCT GCATCGACGG GCTGAGCGCG CAGGAACGCC ACGACCTGGA CTTCGCACAG
GAACAGATCC GCAATTTCAC GCAGGCGCAG CGCGACACCA TGCTGGACCT TGAGGTCGAG
CCGCTGCCGG GCGTCATCCT GGGCCACAGG AACGTGCCGA TCCAGAATGT CGGCTGCTAT
GTCCCGGGCG GGAAATATCC GCTGCTGGCC TCGGCGCATA TGACCGTGCT GACCGCCAAG
GTCGCGGGCT GCCAGCGCGT CATCACCTGC GCCCCGCCCT TCAAGGGCAG GATCGCCGAC
AAGATCGTGG CCGCCCAGGC GCTGGCCGGC GCGGACGAGA TCTATTGTCT AGGCGGCGTG
CAGGCCATCG CCGCCATGGG CTACGGCACC GAGACCATCG CCCCGGTGGA CATGCTGGCC
GGTCCCGGCA ACGCCTATGT CGCCGAGGCC AAGCGATTGC TCTTCGGCAA GGTCGGCATC
GACCTGTTCG CCGGCCCGAC CGAGACGCTG GTCATCGCCG ACGACAGCGT GGACGGCGAG
ATCTGCGCCA CCGACCTGCT GGGCCAGGCC GAGCACGGCC CGAACTCGCC GGCGGTGATG
ATCACCAATT CGGAAAAGCT GGCCCGCGAC ACGCTGCGCG AGATCGAGCG GCTGCTGCAA
CTGTTGCCCA CCGCAGAGAT CGCCCGCAAG GCATGGGTGG ATTACGGCGA AATCATCCTG
TGCGACACGC TGGACGAGAT GGTGGCCGAG GGTGATCGCC TGGCCTCGGA ACATGTGCAG
GTGATGACCG CCGATCCCGA CCATTTCCTG AACAACATGA CGAACTATGG CGCGCTGTTC
CTTGGCGCGC GCACCAATGT CGCCTTCGGG GACAAGGTGA TCGGCACCAA CCACACGCTG
CCGACATTGC GGGCCGCGCG CTATACCGGC GGGCTGTGGG TCGGGAAGTT CCTCAAGACC
TGCACCTATC AGAAGATCCT TACCGACGAA GCCTCGGCCA TGATCGGCGC CTATGCGTCG
CGCCTGTGCC ACATGGAAGG CTTCGTCGGC CATGCCGAAC AAGCCAATAT CCGTGTCCGC
CGTTTTGGCG GCCGAAACGT GGAATACGGC GCCGCCGTCC AGGCCTGA
 
Protein sequence
MIRHVKTPRL QQGDQTDPAV TEAVEKLLAQ VAEGGDKAVR ELSVRFDGLD RDSYRLTEAE 
IAACIDGLSA QERHDLDFAQ EQIRNFTQAQ RDTMLDLEVE PLPGVILGHR NVPIQNVGCY
VPGGKYPLLA SAHMTVLTAK VAGCQRVITC APPFKGRIAD KIVAAQALAG ADEIYCLGGV
QAIAAMGYGT ETIAPVDMLA GPGNAYVAEA KRLLFGKVGI DLFAGPTETL VIADDSVDGE
ICATDLLGQA EHGPNSPAVM ITNSEKLARD TLREIERLLQ LLPTAEIARK AWVDYGEIIL
CDTLDEMVAE GDRLASEHVQ VMTADPDHFL NNMTNYGALF LGARTNVAFG DKVIGTNHTL
PTLRAARYTG GLWVGKFLKT CTYQKILTDE ASAMIGAYAS RLCHMEGFVG HAEQANIRVR
RFGGRNVEYG AAVQA