Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1024 |
Symbol | |
ID | 4579579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1003043 |
End bp | 1004131 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639768346 |
Product | ABC transporter related |
Protein accession | YP_914831 |
Protein GI | 119383775 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC CACTGGTCTC CTTCGAGGGC GTCGCCAAGC GTTTCGGCAG CTATACCGCC GTGCAAAAGA TGGATCTGCA GATCCACAAG GGGGAATTCC TTGCCATCAT GGGCTCGTCC GGCTGCGGCA AGACCACGAC GCTGCGCATG CTGGCCGGGC TGGAGGCGCC CAGCGAGGGC ATCATCCGCC TGGCCGGCAG GCCGATCAAC GACCTGCCGA GCTGGAGCCG CGACACGCCC ATGGTCTGGC AGAGCCTGGC ATTGTTTCCC TTTCTCAACG TGATCGAGAA TGTCGAGTTC GCGCTGAAGA TGCGCGGCAT AGGCCGGGCC GAGCGCCGGC GCCGGGCCGA ACAGTGGCTG GACCGCATGC AGATCGCCGA GTTCGCCAGC CGCAACATTG GCCAGCTTTC CGGCGGCCAG CGTCAGCGTG TCGCCCTGGC GCGTTCGTTG GTGGTCGAGC CCGATATCCT GCTGCTCGAC GAGCCGCTTT CGGCGCTGGA TGCGGCGCTG AAGGTACGGA TGCAATCGGT GCTCAAGAAC CTGCAACGCG AGACCGGCAT CACCTTCGTC TATGTCACGC ATAGCCAGTC CGAAGCCTTC TCGATGGCCG ACCGGGTCGT CATCATGAGC CGGGGCAAGA TCGAACAGAT CGGCACACCG CAGGAAATCT ATCGCACGCC CCGCACGCGC TTCGTCGCGG ATTTTCTGGG GTCGTCCAAT ATTTTCCCGG GCCAGTTGCA GCAGGACCGG AGCGGCCGTG CCGCCATCGC CACGGCCAGC GGCCATTTCC TGCTTGCCGA AGATGCGGCA GCCTCGGCAA TGCCAGGGCA ATCGGCCAGC CTGACGGTGC TGGACACCAG GATGCAGATC CATCTTCAAC CGCCGGCAGA CGCGGTGAAC ATGGTCGAGG CGCGCATGAT CGGCGAGGAA TTCGTCGGCG CCACCGCCAC CATCTATTTC GAAACCGGCG CGGGACAGGA AATACGGGTG CAGAAATCGC ATGAAGAACT GGCCGACCTT CCGCTGGCCG TGGGCCGTTC CTTTCACTTG TCATGGCTTC CCGCAGATGG ACATCTCGTG CCAGAATAG
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Protein sequence | MQEPLVSFEG VAKRFGSYTA VQKMDLQIHK GEFLAIMGSS GCGKTTTLRM LAGLEAPSEG IIRLAGRPIN DLPSWSRDTP MVWQSLALFP FLNVIENVEF ALKMRGIGRA ERRRRAEQWL DRMQIAEFAS RNIGQLSGGQ RQRVALARSL VVEPDILLLD EPLSALDAAL KVRMQSVLKN LQRETGITFV YVTHSQSEAF SMADRVVIMS RGKIEQIGTP QEIYRTPRTR FVADFLGSSN IFPGQLQQDR SGRAAIATAS GHFLLAEDAA ASAMPGQSAS LTVLDTRMQI HLQPPADAVN MVEARMIGEE FVGATATIYF ETGAGQEIRV QKSHEELADL PLAVGRSFHL SWLPADGHLV PE
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