| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0969 |
|---|
| Symbol | |
|---|
| ID | 4579543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 953392 |
|---|
| End bp | 956043 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639768291 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_914776 |
|---|
| Protein GI | 119383720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.136087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAGC ATCCTTCCTA TGACGATTTC CTGCGCGCCA AGGCCGCCAT CGCGCCGCGC
TTCGGCGGCA TGCAGGTGGA CGAGGCGACC CTGAACCCGG CGCTCAAGCC GCACACCCGC
CGCATGGTGG CCTGGGGCCT GCAGGGCGGC CGGCGCGCCT GGTTCGCGAA CTTCGGCCTG
CACAAGACCG CGACGCAGCT GGAGACCATG CGCGTGCTGA CCGAGACGAC CGGCCAGCCG
ACGCTGATCA CCGCGCCGCT GGGCGTGCGA CGCGAGTTCA TGCGCGAGGC GCAGGAGCGG
TTCCGCGGGT CGTTCGCCGT GGACCTGAAA TTCATCCGCG ACACGGACAA GGTCGACGGG
CCGGGCATCT ACCTGACCAA CTACGAATCG GTGCGCGAGG GCAAGGTTTC GCCCGATCCG
TTCATCGGCG TCAGCCTCGA CGAGGCCGCG ATCCTGCGCG GCTTCGGCGG CACCAAGACC
TTCCGCGAGT TCATGGCGCT GTTCGCCGGC GACGACCGGC GCGACCAGTC GAACCGGGTC
AAGACCGCCG GCGTGCCCTA TCGCTTCGTC GCCACCGCCA CGCCCAGCCC GAACGACTAT
ATCGAGCTGC TGTCCTATGC CGGCTTCCTC GACGTGATGG ATATCGGCCA GGCCAAGACC
CGGTTCTTCA AGCGCAACTC GGAAAAGGCC GACCAGCTGA CCCTGATGCA GCACAAGGAG
CGGGAATTCT GGCTGTGGGT CGCGTCCTGG GCGCTGTTCG TCACGAAGCC CAGTGATCTG
GACCCGTCGT TTTCAGACGA GGGCTACGAT CTGCCGCCGC TCGACGTGCG ATGGCACGAA
CTGCCGGTCG ATCACCTCGC CGGCGCCGCG GTCGAGAAGA GCGGCCAGAA GCGCATGTTC
AAGGATGCGA CGGCCGATCT GTCGGCCGCG GCGCGCGAGA AGCGCGAGAG CCTGCCGGCG
CGGATCGAGA AGCTGATGGA GATCCGCGCC GAGGACCCGG CCGCGCACCG GATCATCTGG
CACGACCTCG AGGATGAACG CCGAGCGCTG GAAAAGGCCG TGCCTGGCAT TGTGACCATC
ACGGGGAACG GTTCGCAGAA ATTGGACCGC CGCGAGGAGC TGATCGGCGA TTTCGCCGAC
GGCCGGGTGC AGGAGCTGGG CGCCAAGCCG GTGATGTTGG GCAGCGGGAC CAACCTGCAA
CGGCACTGCG CCTGGCACGT CTTTCTCGGC ATCGGCCACA AGTTCAACGA TTTCATCCAG
GCGATCCACC GCCTGCTGCG GTTCGGCCAG CCCGCCGACA GCGTGCGGCT CGACCTGATC
TACACCGAGG CTGAACGCGA AATCCGCCGC TCGCTGGAGC GGAAGTGGCG TCAGCACAAC
GAGATGGTTC AGAAAATGAT CGACATCATC AAAGAGTTCG GCCTGTCCGA GGTCGCGATG
CAGCAGGCGC TGGTGCGCGC CCTCGGCGTC GAGCGGGTCG AGGCCTCGGG GCCGGATTAC
CGCTGTGTCC ACAACGATTG CGTGGCCGAG ACCCGCAGCA TGGCCGACGC CTCGGTGCAG
CTGATCGTCA CCTCGATCCC GTTCAGCACC CAGTATGAGT ATTCGCCGAA CTATGCGGAT
TTCGGCCATA CCGACGACGA TCCGCATTTC TGGCAGCAGA TGGGGTTCCT GATCCCCGAG
CTGCTGCGCG TGCTGGAGCC GGGCCGGATC TGCGCGATCC ACGTCAAGGA CCGGATCATC
CCCGGGGGCA TCAACGGCTT CGGTTTCCAG ACCCTATCGA CCCTGCACAT GGATTGCGTG
CGCGAGTTCC AGCGCCACGG CTGGGCCTAT CTCGGTATGA AGACCATCAC GACCGATGTC
GTGCGCGAGA ACAACCAGAC CTATCGCCTG GGCTGGTCGG AACAGTGCAA GGACGGCAGC
CGCATGGGCT GCGGCGTGCC GGAATACCTG CTGATCTTCC GCCGGCCGCC CAGTGACACC
AGCAACGGCT ACGCCGACCG GCCGGTGAAG AAGGCCAAGA AGGAATGGGA CCCCGAGGCC
AAGGACTGGC GCAACGAGGG CGGCTATAGC CGCGCCCGCT GGCAGATCGA TGCCCACGGC
TACATGCGGT CGAATGGCGA CCGGACCCTG CTGCCCGAGG AACTGGAGGG GCTGGACGCG
GACCAGGTCT ACAAGGTCTG GAAGGCCTAC AACCTGCAGC AGGTCTATGA TTTCGAGCAT
CACGTTCAGA TCGGCGAAGC CCTCGAGGTG AAGGGCCGGC TGCCGCCGAC CTTCATGCTG
CTGCCGCCGC ATAGCGCGCA TCCCGATGTC TGGACCGATG TCGCGCGCAT GATGACCATC
AATGCCGAGC AGGCGCGCAA GGGCAACGAG ATGCATCTCT GCCCGCTGCA ATACGACATC
GTGGACCGGG CCATCGCCCA ATACACCGAG CCGGGCGAAT GGGTCTACGA CCCGTTCGGC
GGGCTGATGA CCGTGCCCTT CCGCGCCATC AAGCTCGGCC GCAAGGGCAT CGGGGTCGAA
CTGAACAAGG GATACTGGCT CGACGGCTGC AAATACGTCG AGGCCGCCTC GCGCGAGGCT
GGCATGCCCA GCCTCTTCGA CCTCCTCGAC GCCGATCAAC CCGAAAACCA GAAGCTGCGG
AGGACCGCGT GA
|
|---|
| Protein sequence | MGQHPSYDDF LRAKAAIAPR FGGMQVDEAT LNPALKPHTR RMVAWGLQGG RRAWFANFGL
HKTATQLETM RVLTETTGQP TLITAPLGVR REFMREAQER FRGSFAVDLK FIRDTDKVDG
PGIYLTNYES VREGKVSPDP FIGVSLDEAA ILRGFGGTKT FREFMALFAG DDRRDQSNRV
KTAGVPYRFV ATATPSPNDY IELLSYAGFL DVMDIGQAKT RFFKRNSEKA DQLTLMQHKE
REFWLWVASW ALFVTKPSDL DPSFSDEGYD LPPLDVRWHE LPVDHLAGAA VEKSGQKRMF
KDATADLSAA AREKRESLPA RIEKLMEIRA EDPAAHRIIW HDLEDERRAL EKAVPGIVTI
TGNGSQKLDR REELIGDFAD GRVQELGAKP VMLGSGTNLQ RHCAWHVFLG IGHKFNDFIQ
AIHRLLRFGQ PADSVRLDLI YTEAEREIRR SLERKWRQHN EMVQKMIDII KEFGLSEVAM
QQALVRALGV ERVEASGPDY RCVHNDCVAE TRSMADASVQ LIVTSIPFST QYEYSPNYAD
FGHTDDDPHF WQQMGFLIPE LLRVLEPGRI CAIHVKDRII PGGINGFGFQ TLSTLHMDCV
REFQRHGWAY LGMKTITTDV VRENNQTYRL GWSEQCKDGS RMGCGVPEYL LIFRRPPSDT
SNGYADRPVK KAKKEWDPEA KDWRNEGGYS RARWQIDAHG YMRSNGDRTL LPEELEGLDA
DQVYKVWKAY NLQQVYDFEH HVQIGEALEV KGRLPPTFML LPPHSAHPDV WTDVARMMTI
NAEQARKGNE MHLCPLQYDI VDRAIAQYTE PGEWVYDPFG GLMTVPFRAI KLGRKGIGVE
LNKGYWLDGC KYVEAASREA GMPSLFDLLD ADQPENQKLR RTA
|
|---|
| |