| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0961 |
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| Symbol | |
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| ID | 4579672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 948709 |
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| End bp | 949788 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768283 |
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| Product | phage integrase family protein |
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| Protein accession | YP_914768 |
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| Protein GI | 119383712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0178489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.193987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTGA AGGGGATCAG ACGCCAGAAG CGCGGCGACA AGGTGATCCG CTATCATCGG
GCCACCGGAA TCCGCCTGCC TGACGATATC CCCGAGACAC ACCCGGATTT TGTCTCGGCA
TGGGCTCGGT GCGAGGCAGG GCAAGGGCAA CCGGACGCAC CGAAGGCTCC AGCGCCGACG
GGATCGTTGG CAGCGGCCTG CATCGCCTTT CGGGGCTCGC CATCGTTCAA GGAGCAATCG
CCGGTCTATC GCGACATCCT GACCCGTAAC ATCGAGGCGA TCCGCGGCGA ATATGGTCAC
GTCGCGATAA AGGCGATAAA AGCCAAGCAC ATCAGCGCCG ACCTGGCCAA ACTGGCGGGC
ACCAGGCCGC TATCGCGGCT CAAGACCTGG CGCAAGGTCA TGGATCACGC GCGTCGCACC
GGATTGATCG AGGAAGATCC GAGCCTGACC GTGAAGGCTC CAAAGGTGAA GCTGAAGGGG
CATCAGGTTT GGACGGAAGG CGACATAGAG GTGTTCCGGG GGAAATGGAA AATCGGAACC
GTGCAGCGCG CCTGTTTCGA GCTGCTGCTG TGGACCGCGG CGCGGACGGT GGACGCCGTG
CGGATCGGGC CGCAGCACGT CGGCAAGGAC GGCGTGCTGT CGTTCCGGCA GTCCAAGACC
GGGGGTATGG CCTATGTCCC GTGGACCGCG ACCCTACCCA ACTGGGGCGC AGGATGGGCG
GATGAGCGGC GGGAGATGAT GGAGGCGTTA CGGTGCCTCG CCGGCGGGCT GACGTTCCTC
CAGGCGCGCG GCGCGCGGCC GAGATCGGAG AAGGGGCTTA GCAACCTCAT CAGCGCGGCA
GCACGCGAGG CGAAGCTCGA AGGTCGCACC GCGCACGGGC TTCGCAAAGC GCGACTGACC
CGTATCGCCG AAGCCGGCGG ATCGGCCCAT GCCATCAAGT CGTGGGGCGG TCACAAGACC
TTGGCCGAGG CCGCGCATTA CACCGAGTCA GCGGATGCAA AACGGCTGGT CACCGGCACG
GAACAGGAAC AGAACGCTGT ATCACCTGCC GAACGCGATA CAAAAACCGC AAATAATTGA
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| Protein sequence | MKLKGIRRQK RGDKVIRYHR ATGIRLPDDI PETHPDFVSA WARCEAGQGQ PDAPKAPAPT
GSLAAACIAF RGSPSFKEQS PVYRDILTRN IEAIRGEYGH VAIKAIKAKH ISADLAKLAG
TRPLSRLKTW RKVMDHARRT GLIEEDPSLT VKAPKVKLKG HQVWTEGDIE VFRGKWKIGT
VQRACFELLL WTAARTVDAV RIGPQHVGKD GVLSFRQSKT GGMAYVPWTA TLPNWGAGWA
DERREMMEAL RCLAGGLTFL QARGARPRSE KGLSNLISAA AREAKLEGRT AHGLRKARLT
RIAEAGGSAH AIKSWGGHKT LAEAAHYTES ADAKRLVTGT EQEQNAVSPA ERDTKTANN
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