| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0953 |
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| Symbol | |
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| ID | 4579664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 938429 |
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| End bp | 939892 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639768274 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_914760 |
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| Protein GI | 119383704 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.386047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.950818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG CCGAACATGT GCTGCGCGCG GGCCTTGCCG CACCCGACAG GCTGGCCATG
TCGGTCCTGG GGCTCAGCCG TGCCGACCGC TGGTCGCATG CCCGGCTGCG CCAGGCGGTG
CTGGGCACGG CGACCGGCCT TCTGCAATCC GGCCTCGCGC CCGGAGACCG GCTGCTAATG
CGGCTGGGAA ACAATCCCGG CTTCCCCGTG ACCTATCTCG GCGCCATCGC CGCGGGCATC
ATCCCGGTCC CGACATCGCC GATGCTGACC GCGCCCGAGA TCGGCAAGAT CGCCGCGGCG
ATCCGCCCGG CGATGATCGT CGCCGACGAC GGTATCGCCC TGCCCGACCA CCCGGCCCCG
GTGCTGCCCG CCGCACAGCT CGCCGATTTC GCCGCGCTGC CGCCGGCCGG GTTCGCGCAG
GCCGCACCCA ACGACCTGGC CTATATCGTC TTCACCTCGG GCACCTCGGG CCAGCCGCGC
GCCGTCTGCC ATGCGCATCG CGCCATCCTT GCCCGCCAAA TGATGTTTCA GGGCTGGTAT
GGGCTGACCG CGCAGGACCG ACTGCTGCAT GCCGGCGCCT TCAACTGGAC CTTCACGCTC
GGCACCGGGC TCATGGATCC CTGGACCATC GGCGCCACCG CGCTGATCCC GGCCGAAGGC
GTCGCGCCCG AGCAGATCCC GCTGATCGCC AGCCGCCACG GCGCCACCAT CCTTGCCGCC
GCGCCCGGCG TCTTTCGCCG CATGCTGCGC GCCGAATGGC AGCCATGGGC CGGGCTGCGC
CACGGCCTCT CTGCCGGCGA AAGGCTCGAT CCCGGGTTGC GCCGCGACTG GCAGGCGCGC
ACCGGCACCG ACCTGCACGA GGCGATGGGC ATGTCGGAAT GCTCGACCTT CCTGTCCGGC
AGCCCCGCCC GGCCGGCGCC CGAGGGCACG GCAGGCTTTC CCCAGCCCGG CCGCCGCATC
GCCATCCTGG ACGAAACCGG CGCCGAAGCT CTGCCCGGAA CGCCCGGCAT CCTTGCCGTC
CACCGCTCGG ATCCCGGCCT GTTCCTGGGC TATCTCGACC AGCCCGAAGA GACGGCCGCC
CGCTTCCAGG GCGACTGGTT CCTGACCGGC GACCTTGCCG AGGCGACGCC CGAGGGCGCG
ATCCGCACGC TGGGCCGCTC GGACGACATG ATGAATGCCG GCGGCTTTCG CGTCGCGCCG
GGCGAGGTCG AGGACGCGCT TTCGGCCCTA CCCGATGCCG GGGACGTCGC CGCCGCCGAA
CTGCCGGTCG GCCCCGGCCT CAGCATCATC GCCGCCTTCT GGACCGGCCC CGCCAGACCC
GAGGCGATGC GTCAGCAGGC CGAAACCACG CTTGCGCGCT ACAAGCAGCC GCGCGAATAC
ATCCGCCTGC CCGCCCTGCC CCGCACGCCG ACGGGCAAGA TCAACCGCCG CGCCCTGCGC
GACATTCATC GCAAGGATCG CTGA
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| Protein sequence | MNLAEHVLRA GLAAPDRLAM SVLGLSRADR WSHARLRQAV LGTATGLLQS GLAPGDRLLM
RLGNNPGFPV TYLGAIAAGI IPVPTSPMLT APEIGKIAAA IRPAMIVADD GIALPDHPAP
VLPAAQLADF AALPPAGFAQ AAPNDLAYIV FTSGTSGQPR AVCHAHRAIL ARQMMFQGWY
GLTAQDRLLH AGAFNWTFTL GTGLMDPWTI GATALIPAEG VAPEQIPLIA SRHGATILAA
APGVFRRMLR AEWQPWAGLR HGLSAGERLD PGLRRDWQAR TGTDLHEAMG MSECSTFLSG
SPARPAPEGT AGFPQPGRRI AILDETGAEA LPGTPGILAV HRSDPGLFLG YLDQPEETAA
RFQGDWFLTG DLAEATPEGA IRTLGRSDDM MNAGGFRVAP GEVEDALSAL PDAGDVAAAE
LPVGPGLSII AAFWTGPARP EAMRQQAETT LARYKQPREY IRLPALPRTP TGKINRRALR
DIHRKDR
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