Gene Pden_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0936 
Symbol 
ID4579410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp916811 
End bp917329 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID639768257 
ProductMarR family transcriptional regulator 
Protein accessionYP_914743 
Protein GI119383687 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.798815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGC GCAGCTCTGC CCAAACGGTG CCCGCCCTGC GGCCCCCGCC GCCGCAGACC 
GACCGGACCG AGGCTTATCT GGAAAGCCTG CAGATACTAG AGCGACTGCA CCGGCTGCTG
CTGGATCTGG TCAAGGACGA GTTCGAGCGG CTGGGCCGAT CCGACCTGAC GCCGGTGCAG
GCATTGTTGA TCTACAACCT CGGCACGTCC GAGGTGACGG CGGGCGAGTT GCGGTCGCGC
GGCATGTATC AGGGCTCGAA CGTGTCCTAC AATCTCAAGA AACTGGTCGA GCTGGGCTAT
GTCCACCACG AACGCTGCGA CATGGACCGC CGCGCCGTCC GGGTGCGGCT GACGCAGGCG
GGGCAAGAGG TGCGCGACTG CGTGGCGCAG CTGTTCGCCC GCCATGCCGA GGGGCTGGAT
CTGTCGGGCG TGCTGGACGA CCCGCCGATC GAGGCGGTGA ACCTGCAATG GCGCCGGGTC
GAGCGGTTCT GGGCCGAGCA GATCCGCTAT ATCTATTGA
 
Protein sequence
MQQRSSAQTV PALRPPPPQT DRTEAYLESL QILERLHRLL LDLVKDEFER LGRSDLTPVQ 
ALLIYNLGTS EVTAGELRSR GMYQGSNVSY NLKKLVELGY VHHERCDMDR RAVRVRLTQA
GQEVRDCVAQ LFARHAEGLD LSGVLDDPPI EAVNLQWRRV ERFWAEQIRY IY