Gene Pden_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0916 
Symbol 
ID4579065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp898903 
End bp899223 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content65% 
IMG OID639768237 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_914723 
Protein GI119383667 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.354828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGG TTGCCCGCAA GGCCCTGCTG ACAGCGCGTC GCCAGGCCCT TCTTGTCGAT 
CTGGCCAACA TTCGGGACCA GCTTGACGAT CCCTTGCCCC AGGACTGGGA CGATGCGGCC
ATCGAGCAGG AAGACGACGA GGTTCTCCAG GCTCTCGGTC ATGCCCACCA AGCCGAACTG
AACCGGATCG ACGCTGCCCT CAGGCGCATC GACAGTGGCG ATTACGGCTT TTGCGCCGGT
TGCGGGGATG TCATCCTGCC GGCCCGGCTG GATTTGCTGC CCGACACGCC GCTTTGCGCG
CATTGCGCCG CGGGGGCGTG A
 
Protein sequence
MDPVARKALL TARRQALLVD LANIRDQLDD PLPQDWDDAA IEQEDDEVLQ ALGHAHQAEL 
NRIDAALRRI DSGDYGFCAG CGDVILPARL DLLPDTPLCA HCAAGA