| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0901 |
|---|
| Symbol | |
|---|
| ID | 4578579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 885783 |
|---|
| End bp | 886904 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639768221 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_914708 |
|---|
| Protein GI | 119383652 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.104569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTT CGACCTATGT CGCGCGGCGC TTCCTGCGCA TGCTGGTGAT GATCGCGGCG
ATCTTCGGCG CCATCCTGTT CCTGATCGAC ATCGTCGAGC AGATCCGCCG CTTCTCGGAC
GAGAATATCG GGCTTTCGGG CGCGGCGGGG CTGTCGCTCC TGAACATCAC CGCCAGTTTC
TATTCCATCC TGCCGCTGAT CACCGTGCTG GCGGGGATCG CGCTGTTTCT GAACCTGTCG
CGCAGTTCGG AACTGGTGGC GATCCGCGCC TCGGGGCGCT CGGGCATCCG GGTGCTGGCG
GCACCGGCCG TGACCGCGGC GCTGGCCGGG ATGCTGGCGG TGGCGGTGCT GAACCCGGTG
GTGGCGGCGA CCACGAAACG CTATGACGAC GCGGTCGCGC AGATGCGCAG CGGCGGCGGC
CAGACCGTCA GCGTCGGCGA CAATGCGGTC TGGCTGCGCC AGGCGCTGCC GACGCGCAAC
GGGAACGGGG ACGAGACCTC GGGCCAGGTC GTGATCCGGG CAAGCCGCGC AAGCCCCGAC
GCCACCACGC TTTACGATGC GACCTTCATG GTATTCGCGC CCGATACCGG CCCGACCCGG
CGCATCGACG CGGCCACGGC CCGGCTGACG CAGGGTGCGT GGGAGCTGAC CGACATCAAG
GAATGGCCGC TGACCCAACC CAATCCCGAG ACCATGGCCC GCACCGCGCC GCGGCTGGAA
CTGCCCACCG ACCTGACCGC CGCCCGCATC CGCGACAGTT TCGGCCGGCC CGAGGCGATC
CCGGTCTGGC AACTGCCCGC CTTCATCAAG GGGCTGGAGC GGGCGGGCTT CTCGGCCCAG
CGCCACAAGG TCTGGTTCCA GATGGAGCTG GCCCGGCCGC TGCTGCTGGC GGCCATGATC
GCCATTGCGG CCGTGTTCAC CATGCGCCAC ATGCGCGGGC GCAGGATGGG GTTGCTGGTC
CTGGGCGCCT TTGGCTGCGG CATCGGGCTG TTCTTCCTGC GCAACCTGGC GCAGGTGCTG
GGCGACAATG GCGGCATCCC GCCGGCCCTG GCCGGCTGGG CGCCGCCCAT CGTGGCGCTG
CTTTTCGCCC TTGGGGCGCT CTTGCGGCTG GAGGACGGCT GA
|
|---|
| Protein sequence | MILSTYVARR FLRMLVMIAA IFGAILFLID IVEQIRRFSD ENIGLSGAAG LSLLNITASF
YSILPLITVL AGIALFLNLS RSSELVAIRA SGRSGIRVLA APAVTAALAG MLAVAVLNPV
VAATTKRYDD AVAQMRSGGG QTVSVGDNAV WLRQALPTRN GNGDETSGQV VIRASRASPD
ATTLYDATFM VFAPDTGPTR RIDAATARLT QGAWELTDIK EWPLTQPNPE TMARTAPRLE
LPTDLTAARI RDSFGRPEAI PVWQLPAFIK GLERAGFSAQ RHKVWFQMEL ARPLLLAAMI
AIAAVFTMRH MRGRRMGLLV LGAFGCGIGL FFLRNLAQVL GDNGGIPPAL AGWAPPIVAL
LFALGALLRL EDG
|
|---|
| |