Gene Pden_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0860 
Symbol 
ID4578657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp848305 
End bp848799 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content68% 
IMG OID639768179 
Producthypothetical protein 
Protein accessionYP_914668 
Protein GI119383612 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.299856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGC GGGCCGCAAC GGTTTTTCTA GCTCTTCTTG CCTACAATCC ATCCCTGGCC 
CTTGCGGCCA CATGCCATCC CGATCGGGCG CTGTTCCAAG GCAGGGGCGC GCCCGTCGAA
GTCTCGGTCG AGATTGCCGA TTCCGGCAAG GAACGCGCGC GGGGCCTGAT GTTCCGCCGC
GACCTGCCGC CGGGGCAGGG CATGCTGTTC ATCTACGAAT CGCCGCAGCC AATCAGTTTC
TGGATGCGCA ACACGCTGAT CCCGCTCGAC ATGATCTTCA TCGACGCGCG CGGCGAGGTG
CGTCACGTCC ATCCCATGGC GCAGCCGCTG GACGAGACCG AGATTCCCGG CGCCGCGCCC
GGCGATCCTG AACCCGAGCG CCTGATGGTG CTGGAGGTGC CGGGGGGCGA CGCGGCGCGG
CTAGGCATCC GCCCCGGCAT GGTGCTGTCG CATCCGCGCC TGCCGCAGGA CGGCGCGCTG
GCGCCCTGCG ACTGA
 
Protein sequence
MKLRAATVFL ALLAYNPSLA LAATCHPDRA LFQGRGAPVE VSVEIADSGK ERARGLMFRR 
DLPPGQGMLF IYESPQPISF WMRNTLIPLD MIFIDARGEV RHVHPMAQPL DETEIPGAAP
GDPEPERLMV LEVPGGDAAR LGIRPGMVLS HPRLPQDGAL APCD