Gene Pden_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0820 
Symbol 
ID4580566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp794627 
End bp794992 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content68% 
IMG OID639768139 
Productanti-sigma-factor antagonist 
Protein accessionYP_914628 
Protein GI119383572 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA CACTGCTGCT CCAGCCGGAC GGGCTGACGA TCCGCGTCGA TGAAAAGCGC 
CTCGACGCCG CCATCGCCAC CGCCTTCAAG GACCGCGTGC GCGGCCTGAT CGCGCGGGGT
GGACCACATG TGACGCTGGA TCTGGGCGGG GTCGAATTCA TGGACAGCTC GGGCCTTGGC
GCGGTGATCG CGATCTACAA GGCCATGCCC CCCGGGCGGC AGCTGACGCT GACCGGGCTG
ACGCCGAATG TCGAGCGGGT GTTCCAGCTG ACCCGGATGC ATACCGTGCT GACCATCCGC
AAGACCGGCG ACGCGCCCGA GCCCCCCGGT GACCCCGACC CGGGGCAGAA AAGGCCCGAA
GAATGA
 
Protein sequence
MQLTLLLQPD GLTIRVDEKR LDAAIATAFK DRVRGLIARG GPHVTLDLGG VEFMDSSGLG 
AVIAIYKAMP PGRQLTLTGL TPNVERVFQL TRMHTVLTIR KTGDAPEPPG DPDPGQKRPE
E