| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0802 |
|---|
| Symbol | |
|---|
| ID | 4580626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 776752 |
|---|
| End bp | 777690 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639768121 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_914610 |
|---|
| Protein GI | 119383554 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.882657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.847152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT ATGTGATCCG CCGCCTGATC TCGCTTGGCC TGAGCCTGCT CGTGGCCTCG
GCGCTGATCT TTTCGGTGGT CGAGCTGGTG CCGGGCGATC CGGCCAGCTT CATGCTGGGC
ACCGGCGCGC AGCCCGAGAC GGTGGCCGCG CTGCGCCAGC AGATGGGCTT GGACCTGCCC
TTGCCGCTGC GCTACCTGCA TTGGCTGGGC GGGGTGCTGA CGGGCGACCT GGGTCACAGC
TTCACCTACA AGACGCCGGT GGCGGGGATG ATCCTGGACC GCATGCAGGT CTCGTTGCCC
CTGGCGCTGA TGGCGCTGGC GCTGGCGGTG CTGATCGCCC TGCCCATCGG CATGTTCGCC
GCCGCAAGGC GCGGGCGGAC GGGCGACACG GCGGTCATGG GGGCGACGCA GATCGGCATC
GCGCTGCCGA ATTTCTGGTT CGCCATGCTG CTGGTGCTGC TTTTCGCGGT GAACCTGCGG
TGGCTGCCGG CGGGCGGCTT TCCGGGCTGG AGCCATCCCG GCGCCGCGCT GAAATCGCTG
CTCCTGCCCG CCGTCGCGCT GGCGCTGCCG CAGGCGGCGA TCCTGGCGCG CGTGCTGCGC
TCGGCCCTGG TCGAGACGCT GGGGCAGGAC TATATCCGCA CCGCCCGCGC CAAGGGGCTG
ACCGCCGGGC AGGTGCTGTC GCGCCATGCG CTGCGCAATG CGCTGATCCC GGTGCTGACC
ATCCTGGGGA TGCAGTTCTC GTTCCTGCTG GCCGGGGCGA TCATCATCGA GAACGTCTTC
TACCTGCCCG GCCTGGGCCG GCTGATCTTT CAGGCGATCA CCCAGCGCGA CCTGATCGTC
GTGCAAAGCG CGGTGCTGGT GCTGGTCGCG GCGGTGATCC TGGTCACCTT CCTTGTCGAC
CTGTCCTATG CGCTGGTCGA TCCGAGGTTG CGCAAATGA
|
|---|
| Protein sequence | MLRYVIRRLI SLGLSLLVAS ALIFSVVELV PGDPASFMLG TGAQPETVAA LRQQMGLDLP
LPLRYLHWLG GVLTGDLGHS FTYKTPVAGM ILDRMQVSLP LALMALALAV LIALPIGMFA
AARRGRTGDT AVMGATQIGI ALPNFWFAML LVLLFAVNLR WLPAGGFPGW SHPGAALKSL
LLPAVALALP QAAILARVLR SALVETLGQD YIRTARAKGL TAGQVLSRHA LRNALIPVLT
ILGMQFSFLL AGAIIIENVF YLPGLGRLIF QAITQRDLIV VQSAVLVLVA AVILVTFLVD
LSYALVDPRL RK
|
|---|
| |