Gene Pden_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0735 
Symbol 
ID4579603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp718358 
End bp719248 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID639768053 
Productcarboxymethylenebutenolidase 
Protein accessionYP_914543 
Protein GI119383487 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0400913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GCAGGAAGGC TTCCGACTTT CACCCCCGCA TCCTCGAGAT CTTCGACGGC 
TATGTGCATG GCCGAATCGG CAAGCGCGAC TTCATGGTGC AGGCGGCACA ATTCGCCACG
GCGGGCATGA CCGCCGCCGC GATCTTCGAG GCGCTCAAGC CGAACTACGC CCTGGCCCAG
CAGGTGCCGC CAGACGACCC CGCCATCGCG ACCGAGACCG CAAGCTATGA CAGCCCCGAG
GGCCATGGCC GCATCAGCGG GCTGATGGCG CGGCCGGCCG GGGCGCAGGG CAAGCTGCCC
GCCGTGCTGG TGGTGCACGA AAATCGCGGG CTGAACCCCT ATGTCCAGGA TGTCGTGCGG
CGCTTGGGCA AGGCGGGCTA CCTGGCCTTC GGCCCGGACG GGCTGAGCCC GCTTGGCGGC
TATCCCGGCA ATGACGACGA GGGGCGCGAG ATGCAGGCGA GCCTCGACCC GGCCAGGCTG
ATGGAGGATT TCTTCGCCGC CCATGAATTC CTGCGCGACC ATGCCGATTC GACCGGCAAG
GTCGGCGCGG TCGGCTTTTG CTATGGCGGC GGGGTCTGCA ACGCGCTGGC GGTGGCCTAT
CCCGAACTGG CCGCCTCGGT CCCCTTCTAC GGCCGCCAGC CCCGGCCCGA AGAGGTAGCG
CAGATCCAGG CGCCGCTGAT GCTGCATTAC GCCGAGAAGG ACGAGCGTGT GAACGAGGGC
TGGCCAGCCT ATGAGGCGGC GCTGAAGGAG CAGGGCAAGG AATATCAGGC ATTCTTCTAT
CCCGGCACCC AGCACGGTTT CCACAACGAC ACCACGCCGC GCCATGACGA GGCGGCGGCG
GAACTCGCCT GGCAGCGAAC GCTGGATTTC TTTGCCGAAA AGCTCTCCTG A
 
Protein sequence
MTERRKASDF HPRILEIFDG YVHGRIGKRD FMVQAAQFAT AGMTAAAIFE ALKPNYALAQ 
QVPPDDPAIA TETASYDSPE GHGRISGLMA RPAGAQGKLP AVLVVHENRG LNPYVQDVVR
RLGKAGYLAF GPDGLSPLGG YPGNDDEGRE MQASLDPARL MEDFFAAHEF LRDHADSTGK
VGAVGFCYGG GVCNALAVAY PELAASVPFY GRQPRPEEVA QIQAPLMLHY AEKDERVNEG
WPAYEAALKE QGKEYQAFFY PGTQHGFHND TTPRHDEAAA ELAWQRTLDF FAEKLS