| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0727 |
|---|
| Symbol | |
|---|
| ID | 4579536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 708329 |
|---|
| End bp | 709624 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639768045 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_914535 |
|---|
| Protein GI | 119383479 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.242585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.505103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATGCG CCGCGCCCCA GCAAGATGCG GACGGACCGA ATGCCGGAAC TATAAGGATC
GCCATGACTC AGATGTCGCT GCCGCGCCAC CGCGCGGGGA CCGCCGTTGC GTTGACTTGC
CTGCTGCTTA CCGCGCCGCT CTCGGCCCAG GAAAGCACCA CCAGCGGCCA GCCCGGCCCG
GCGCCCGAGG TTCAGGCCCA GCCGGCCAGC CCGGCTGCAC CCGAGGCGGC CGCACCGCAA
ACCGCCGCAC CGGAAACGAC AGCGCCGGCA ACCCCTGCCC CCGCAACCCC CGAACCTGCG
GCGACCGAGA CCACCCCGCC GACCCAGGCG CCCGAGACGG CCGCCCCGGC GACCCCGGCA
ACCCCGCCTG CGGCAACGGA GCCCGCCCCC ACCGCGACCA CGCCGGAAAC CGTCGAGCCG
GCCCCGGCCA CCCCGGCGCC CGCCGCCGAA GCACCGGCCG CCCAGACCCC CGCGACAACG
CCCGAAACCC CCGCTCCGGC GACCCCGGAA GCGGCCGAGC CCGCCGGCTC GGGCTTCTTG
CCGCAGGCGG TGCAGGACGC GCTGGCGCCG ATGCTGACCC CACCGGAACG CGATCCGAAC
CTGCCGCATG ACCTGTCCCC CTGGGGCATG TTCCTGGCCG CCGACTGGGT GGTGAAGGCC
GTGATGATCG GCCTGGCCTT CGCTTCGGTC GTGACCTGGA CGGTGCTGGT CGCCAAGGTG
CTGGAGCTGC TGGGCGCCAC GAACCGCGCG CAATCCGGCA TCCGCCGCAT CGAGCACGCC
GCAAGCCTGC CCGCCGCCCT GGCCTCGGCC GGCAGCCGCC GCGACCCGGT CTCGCGCATG
ATCCGCGCCG CCGCCGCCGA ATACGACCGC TCGGCCCCCG CGCTGGACCA GGCCGGCGAC
TCGGGCATCA AGGAGCGCGT CGATTCGCAT CTGGACCGGA TCGAGGCCAT CGCCGGCCGC
CGCATGAGCC GGGGCACCGG CGTGCTGGCC ACCATCGGTT CGACCGCGCC CTTCGTGGGG
CTGTTCGGCA CCGTCTGGGG CATCATGAAC AGCTTCATCG GCATTTCCCA GGCGCAGACG
ACCAACCTTG CCGTCGTGGC GCCAGGCATC GCCGAGGCGC TGCTGGCCAC CGCCATCGGC
CTGGTCGCCG CCATCCCGGC CGTGGTGATC TACAACGTCT TCGCCCGCGC CATCACCGGC
TACCGCCTGC GGCTCGCCAA TGCCGCCGCC GGGGTCAAGC GCCTCGTCAG CCGCGATCTC
GACTTCCGCG GCTCCGTCTC GCGCACGGAG GTCTGA
|
|---|
| Protein sequence | MTCAAPQQDA DGPNAGTIRI AMTQMSLPRH RAGTAVALTC LLLTAPLSAQ ESTTSGQPGP
APEVQAQPAS PAAPEAAAPQ TAAPETTAPA TPAPATPEPA ATETTPPTQA PETAAPATPA
TPPAATEPAP TATTPETVEP APATPAPAAE APAAQTPATT PETPAPATPE AAEPAGSGFL
PQAVQDALAP MLTPPERDPN LPHDLSPWGM FLAADWVVKA VMIGLAFASV VTWTVLVAKV
LELLGATNRA QSGIRRIEHA ASLPAALASA GSRRDPVSRM IRAAAAEYDR SAPALDQAGD
SGIKERVDSH LDRIEAIAGR RMSRGTGVLA TIGSTAPFVG LFGTVWGIMN SFIGISQAQT
TNLAVVAPGI AEALLATAIG LVAAIPAVVI YNVFARAITG YRLRLANAAA GVKRLVSRDL
DFRGSVSRTE V
|
|---|
| |